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NECEvent2014_5_8_scaffold_1195

Alias: 175_008_scaffold_1195

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_1195_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25..276
DNA (252bp) protein (84aa)
Uncharacterized protein n=58 Tax=Escherichia coli RepID=B7N504_ECOLU
rem; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR13048.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_1195_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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623..1657
DNA (1035bp) protein (345aa)
Uncharacterized protein n=54 Tax=Escherichia coli RepID=B7N503_ECOLU rbh
ydfU; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR13047.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_1195_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1605..2213
DNA (609bp) protein (203aa)
Antitermination protein n=68 Tax=Escherichia coli RepID=A7ZM20_ECO24
antitermination protein
Antitermination protein {ECO:0000313|EMBL:EFJ76001.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_1195_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2635..2835)
DNA (201bp) protein (67aa)
Cold shock-like protein CspF n=323 Tax=Escherichia RepID=CSPF_ECOL6
putative cold shock protein
RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:EMX19399.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch
NECEvent2014_5_8_scaffold_1195_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3148..3363
DNA (216bp) protein (72aa)
Cold shock-like protein CspB n=304 Tax=Escherichia coli RepID=CSPB_ECOLI
Qin prophage; cold shock protein
Cold shock protein CspA {ECO:0000313|EMBL:END92474.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_1195_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4126..4332
DNA (207bp) protein (69aa)
Lysis protein S homolog from lambdoid prophage Qin n=353 Tax=Escherichia RepID=ESSQ_ECOLI
Lysis S family protein
Lysis S family protein {ECO:0000313|EMBL:END92472.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_1195_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4361..4648
DNA (288bp) protein (96aa)
Uncharacterized protein n=62 Tax=Escherichia coli RepID=B7N4Z8_ECOLU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE17016.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_1195_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4645..5178
DNA (534bp) protein (178aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esc
Probable lysozyme from lambdoid prophage Qin n=299 Tax=Escherichia RepID=LYSQ_ECOLI rbh
ydfQ; putative lysozyme from lambdoid prophage Qin
NECEvent2014_5_8_scaffold_1195_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5175..5672
DNA (498bp) protein (166aa)
Uncharacterized protein RzpQ n=322 Tax=Escherichia RepID=RZPQ_ECOLI rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL41621.1}; Flags: Fragment;; TaxID=1165949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
hypothetical protein
NECEvent2014_5_8_scaffold_1195_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6036..6248
DNA (213bp) protein (71aa)
Cold shock-like protein CspI n=449 Tax=Enterobacteriaceae RepID=CSPI_ECOL6
cold-shock protein
Cold shock-like protein CspG {ECO:0000313|EMBL:END92468.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_5_8_scaffold_1195_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6478..6750
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=V8KHG3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR13038.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_1195_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6922..7095
DNA (174bp) protein (58aa)
Protein GnsB n=247 Tax=Escherichia RepID=GNSB_ECOLI
hypothetical protein
GnsA/GnsB family protein {ECO:0000313|EMBL:KDZ16185.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_5_8_scaffold_1195_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7114..7461)
DNA (348bp) protein (116aa)
Phage protein n=1 Tax=Escherichia coli KOEGE 131 (358a) RepID=T8LQH4_ECOLX
ybcV; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA66019.1}; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_1195_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7762..7968
DNA (207bp) protein (69aa)
Uncharacterized protein ybcW n=158 Tax=Escherichia coli RepID=E2QMB4_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EII21655.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_1195_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7989..8156)
DNA (168bp) protein (56aa)
Predicted protein n=89 Tax=Escherichia coli RepID=D6IQ32_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EII21617.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_1195_16
Escherichia sp. KTE96, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8843..10945
DNA (2103bp) protein (701aa)
Phage DNA packaging protein n=1 Tax=Escherichia coli KTE96 RepID=S1G710_ECOLX rbh
Phage DNA packaging protein {ECO:0000313|EMBL:EOV91225.1}; TaxID=1182697 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
putative DNA packaging protein of putative prophage ( terminase large subunit) rbh
NECEvent2014_5_8_scaffold_1195_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10942..11154
DNA (213bp) protein (71aa)
Uncharacterized protein n=34 Tax=Enterobacteriaceae RepID=B7NVH6_ECO7I
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA66024.1}; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_1195_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11154..12662
DNA (1509bp) protein (503aa)
Predicted portal protein n=12 Tax=Enterobacteriaceae RepID=J7R7U1_ECOLX rbh
Phage portal protein, lambda family {ECO:0000313|EMBL:EFK70988.1}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
putative portal protein (head-tail preconnector protein) from putative prophage
NECEvent2014_5_8_scaffold_1195_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12607..14634
DNA (2028bp) protein (676aa)
ATP-dependent Clp protease proteolytic subunit n=28 Tax=Escherichia coli RepID=D5CWY2_ECOKI rbh
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|RuleBase:RU003567}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
protease/scaffold protein
NECEvent2014_5_8_scaffold_1195_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14721..15044
DNA (324bp) protein (108aa)
Uncharacterized protein n=61 Tax=root RepID=B7NVH9_ECO7I
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV82157.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_1195_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15037..15312
DNA (276bp) protein (92aa)
Uncharacterized protein n=20 Tax=Enterobacteriaceae RepID=B7L8P7_ECO55
hypothetical protein
Phage protein {ECO:0000313|EMBL:EOV58137.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.
NECEvent2014_5_8_scaffold_1195_22
unknown

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15324..15413
DNA (90bp) protein (30aa)

This feature has no annotations

NECEvent2014_5_8_scaffold_1195_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15410..15763
DNA (354bp) protein (118aa)
Prophage minor tail Z family protein n=1 Tax=Escherichia coli ThroopD RepID=M9E0A8_ECOLX
Phage tail completion protein
Phage tail protein {ECO:0000313|EMBL:EOW05453.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli K
NECEvent2014_5_8_scaffold_1195_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15760..16161
DNA (402bp) protein (134aa)
Minor tail protein U n=218 Tax=Enterobacteriaceae RepID=B7LNP7_ESCF3
Minor tail protein U
Phage minor tail U family protein {ECO:0000313|EMBL:EFU95223.1}; TaxID=670892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_5_8_scaffold_1195_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16172..16768
DNA (597bp) protein (199aa)
Major tail protein V n=75 Tax=Enterobacteriaceae RepID=B7MNG3_ECO45 rbh
tail component of prophage CP-933K
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:EFJ79743.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
Displaying 25 items

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