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NECEvent2014_5_8_scaffold_235_4

Organism: NECEvent2014_5_8_Escherichia_coli_51_170_partial

partial RP 24 / 55 MC: 4 BSCG 23 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(4499..5089)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator in two-component regulatory system wtih UhpB n=76 Tax=Escherichia coli RepID=B7NEY5_ECOLU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 384
  • Evalue 4.70e-104
  • rbh
uhpA; DNA-binding transcriptional activator UhpA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 384
  • Evalue 1.30e-104
DNA-binding response regulator in two-component regulatory system wtih UhpB {ECO:0000313|EMBL:ESA95405.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 384
  • Evalue 6.60e-104

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGATCACCGTTGCCCTTATAGACGATCACCTTATCGTCCGCTCCGGCTTTGCGCAGTTGCTGGGGCTGGAACCTGATTTGCAAGTAGTTGCCGAGTTTGGTTCGGGGCGCGAGGCGCTGGCGGGGCTGCCGGGGCGCGGTGTGCAGGTGTGTATTTGCGATATCTCCATGCCCGATATCTCCGGTCTGGAGCTGCTAAGCCAGCTGCCGAAAGGTATGGCGACGATTATGCTCTCCGTTCATGACAGTCCGGCGCTGGTTGAGCAGGCGCTTAACGCGGGGGCGCGCGGCTTTCTCTCCAAACGCTGTAGCCCGGATGAACTGATTTCTGCGGTGCATACGGTTGCCACGGGCGGCTGTTATCTGACGCCGGATATTGCCATTAAACTGGCATCCGGTCGCCAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGCGGTGAAAGAGATTGCCGCCGAACTAGGTTTGTCGCCAAAAACTGTGCATGTACATCGTGCCAACCTGATGGAAAAACTGGGTGTCAGTAACGACGTTGAACTGGCGCGCCGCATGTTTGATGGCTGGTGA
PROTEIN sequence
Length: 197
MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELISAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW*