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NECEvent2014_5_8_scaffold_235

Alias: 175_008_scaffold_235

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_235_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(139..1530)
DNA (1392bp) protein (464aa)
Hexose phosphate transport protein n=1233 Tax=Enterobacteriaceae RepID=UHPT_ECO57 rbh
phosphoglycerate transporter
Hexose phosphate transporter {ECO:0000313|EMBL:EOV53077.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_5_8_scaffold_235_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1668..2987)
DNA (1320bp) protein (440aa)
Membrane protein regulates uhpT expression n=74 Tax=Escherichia coli RepID=B7NEY3_ECOLU rbh
uhpC; regulatory protein UhpC
Regulatory protein uhpC {ECO:0000313|EMBL:EZK18027.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_235_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2997..4499)
DNA (1503bp) protein (501aa)
Sensory histidine kinase in two-component regulatory sytem with UhpA n=79 Tax=Enterobacteriaceae RepID=B7NEY4_ECOLU rbh
uhpB; sensory histidine kinase UhpB rbh
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ESA95404.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Es
NECEvent2014_5_8_scaffold_235_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4499..5089)
DNA (591bp) protein (197aa)
DNA-binding response regulator in two-component regulatory system wtih UhpB n=76 Tax=Escherichia coli RepID=B7NEY5_ECOLU rbh
uhpA; DNA-binding transcriptional activator UhpA
DNA-binding response regulator in two-component regulatory system wtih UhpB {ECO:0000313|EMBL:ESA95405.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
NECEvent2014_5_8_scaffold_235_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5251..6720)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=80 Tax=Escherichia coli RepID=B7NEY6_ECOLU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ESA95406.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_235_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6996..8291)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=71 Tax=Escherichia coli RepID=B7NEY7_ECOLU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ74902.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_235_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8556..8846)
DNA (291bp) protein (97aa)
Acetolactate synthase isozyme 1 small subunit {ECO:0000313|EMBL:KEN94472.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KEN94472.1};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobact
Acetolactate synthase isozyme 1 small subunit n=1267 Tax=Enterobacteriaceae RepID=ILVN_ECO57
ilvN; acetolactate synthase isozyme 1 small subunit
NECEvent2014_5_8_scaffold_235_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8850..10538)
DNA (1689bp) protein (563aa)
ilvB; acetolactate synthase catalytic subunit (EC:2.2.1.6)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
Acetolactate synthase n=71 Tax=Escherichia coli RepID=B7NEY9_ECOLU rbh
NECEvent2014_5_8_scaffold_235_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11307..11396
DNA (90bp) protein (30aa)
Uncharacterized protein n=308 Tax=Escherichia RepID=B7NQX4_ECO7I
toxic peptide TisB
Uncharacterized protein {ECO:0000313|EMBL:EOV53083.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_235_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11676..12860
DNA (1185bp) protein (395aa)
Multidrug resistance protein D n=134 Tax=Enterobacteriaceae RepID=D3H2H5_ECO44 rbh
emrD; multidrug resistance protein D rbh
Multidrug resistance protein D {ECO:0000313|EMBL:EFJ74913.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_5_8_scaffold_235_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12868..13365)
DNA (498bp) protein (166aa)
Predicted protein n=74 Tax=Escherichia coli RepID=D6IWC5_ECOLX rbh
yidF; putative DNA-binding transcriptional regulator
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAR15346.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_5_8_scaffold_235_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13362..13724)
DNA (363bp) protein (121aa)
Inner membrane protein YidG n=1269 Tax=Enterobacteriaceae RepID=YIDG_ECO57
yidG; inner membrane protein
Inner membrane protein YidG {ECO:0000313|EMBL:EGI08917.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_5_8_scaffold_235_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13714..14061)
DNA (348bp) protein (116aa)
Inner membrane protein YidH n=1254 Tax=Enterobacteriaceae RepID=YIDH_ECO57
inner membrane protein YidH
Uncharacterized protein {ECO:0000313|EMBL:EZJ35062.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_235_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14169..14618
DNA (450bp) protein (150aa)
Inner membrane protein YidI n=193 Tax=Enterobacteriaceae RepID=YIDI_ECOLI
hypothetical protein
Inner membrane protein yidI {ECO:0000313|EMBL:KDU51450.1}; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_5_8_scaffold_235_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14665..16158)
DNA (1494bp) protein (498aa)
Sulfatase yidJ n=96 Tax=Escherichia coli RepID=D6IWC9_ECOLX rbh
yidJ; putative sulfatase/phosphatase
Sulfatase family protein {ECO:0000313|EMBL:KDX23111.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_5_8_scaffold_235_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16155..17870)
DNA (1716bp) protein (572aa)
Transporter n=71 Tax=Escherichia coli RepID=B7NEZ7_ECOLU rbh
yidK; putative symporter YidK rbh
Transporter {ECO:0000313|EMBL:CAR15351.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H
NECEvent2014_5_8_scaffold_235_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18037..18930
DNA (894bp) protein (298aa)
Predicted protein n=75 Tax=Escherichia coli RepID=D6IWD1_ECOLX rbh
yidL; putative DNA-binding transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ESA95420.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_5_8_scaffold_235_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18927..20249)
DNA (1323bp) protein (441aa)
6-phospho-glucosidase (EC:3.2.1.122)
6-phospho-glucosidase n=76 Tax=Escherichia coli RepID=B7NEZ9_ECOLU rbh
Maltose-6'-phosphate glucosidase {ECO:0000313|EMBL:ESA95421.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_5_8_scaffold_235_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20249..21865)
DNA (1617bp) protein (539aa)
PTS system, alpha-glucoside-specific transporter subunit IIBC (EC:2.7.1.69) rbh
PTS system arbutin-like IIC component n=1 Tax=Shigella flexneri serotype X (strain 2002017) RepID=D2AB87_SHIF2 rbh
Phosphotransferase enzyme IIB component glvB {ECO:0000313|EMBL:EQQ00960.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_5_8_scaffold_235_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22161..22877
DNA (717bp) protein (239aa)
Uncharacterized HTH-type transcriptional regulator YidP n=465 Tax=Enterobacteriaceae RepID=YIDP_ECOLI rbh
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:KDV40591.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_5_8_scaffold_235_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22874..24535)
DNA (1662bp) protein (554aa)
Putative transport protein YidE n=183 Tax=Escherichia RepID=YIDE_ECO7I rbh
yidE; putative transporter rbh
Putative transport protein YidE {ECO:0000256|HAMAP-Rule:MF_01016}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_5_8_scaffold_235_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24731..25159)
DNA (429bp) protein (143aa)
Small heat shock protein IbpB (16 kDa heat shock protein B) n=1 Tax=Escherichia coli M605 RepID=F4T5P9_ECOLX
heat shock chaperone IbpB
Small heat shock protein IbpB {ECO:0000256|HAMAP-Rule:MF_02001}; 16 kDa heat shock protein B {ECO:0000256|HAMAP-Rule:MF_02001}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; En
NECEvent2014_5_8_scaffold_235_23
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25271..25684)
DNA (414bp) protein (138aa)
Small heat shock protein IbpA n=1423 Tax=Enterobacteriaceae RepID=IBPA_ECO24
ibpA; heat shock chaperone
Small heat shock protein IbpA {ECO:0000256|HAMAP-Rule:MF_02000}; 16 kDa heat shock protein A {ECO:0000256|HAMAP-Rule:MF_02000}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; En
NECEvent2014_5_8_scaffold_235_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26062..26322
DNA (261bp) protein (87aa)
Uncharacterized protein n=847 Tax=Enterobacteriaceae RepID=D3QW85_ECOCB
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFE61079.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_5_8_scaffold_235_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26324..27538)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=63 Tax=Escherichia coli RepID=B7NF06_ECOLU rbh
yidR; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EFJ75948.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_235_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27639..28739
DNA (1101bp) protein (367aa)
Oxidoreductase n=75 Tax=Escherichia coli RepID=D6IWE0_ECOLX rbh
cbrA; putative oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:ESA95430.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_235_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28700..29680)
DNA (981bp) protein (327aa)
D-galactonate transporter n=1 Tax=Escherichia coli DEC14A RepID=H5N1N0_ECOLX
D-galactonate transporter
D-galactonate transport {ECO:0000313|EMBL:CCK49005.1}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_235_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29726..30874)
DNA (1149bp) protein (383aa)
D-galactonate dehydratase {ECO:0000256|HAMAP-Rule:MF_01289}; Short=GalD {ECO:0000256|HAMAP-Rule:MF_01289};; EC=4.2.1.6 {ECO:0000256|HAMAP-Rule:MF_01289};; TaxID=1444156 species="Bacteria; Proteobacter
D-galactonate dehydratase 2 n=681 Tax=Enterobacteriaceae RepID=DGOD2_ECOSM rbh
galactonate dehydratase
NECEvent2014_5_8_scaffold_235_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30871..31488)
DNA (618bp) protein (206aa)
dgoA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC:4.1.2.21) rbh
2-oxo-3-deoxygalactonate 6-phosphate aldolase n=78 Tax=Escherichia coli RepID=B7NF10_ECOLU rbh
2-dehydro-3-deoxy-6-phosphogalactonate aldolase {ECO:0000313|EMBL:ESA95433.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_5_8_scaffold_235_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31472..31888)
DNA (417bp) protein (139aa)
dgoK; 2-oxo-3-deoxygalactonate kinase (EC:2.7.1.58)
2-oxo-3-deoxygalactonate kinase {ECO:0000313|EMBL:CAR15365.1}; EC=2.7.1.58 {ECO:0000313|EMBL:CAR15365.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enter
2-dehydro-3-deoxygalactonokinase n=1 Tax=Escherichia coli STEC_C165-02 RepID=G1YWU4_ECOLX
Displaying 30 items

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