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NECEvent2014_5_8_scaffold_39

Alias: 175_008_scaffold_39

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Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_39_trna_10
unknown

Not on your lists

comp(407..479)
DNA (73bp)
transferRNA
NECEvent2014_5_8_scaffold_39_trna_9
unknown

Not on your lists

comp(487..558)
DNA (72bp)
transferRNA
NECEvent2014_5_8_scaffold_39_trna_8
unknown

Not on your lists

comp(586..658)
DNA (73bp)
transferRNA
NECEvent2014_5_8_scaffold_39_1
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(877..1716)
DNA (840bp) protein (280aa)
Spermidine synthase n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCB3_9FIRM rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=87
spermidine synthase
NECEvent2014_5_8_scaffold_39_2
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1800..2429)
DNA (630bp) protein (210aa)
UPI0003D5F92F related cluster n=1 Tax=unknown RepID=UPI0003D5F92F rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ14658.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_
hypothetical protein
NECEvent2014_5_8_scaffold_39_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2434..2868)
DNA (435bp) protein (145aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonell
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNP8_9FIRM rbh
cyclophilin type peptidyl-prolyl cis-trans isomerase
NECEvent2014_5_8_scaffold_39_4
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2865..3572)
DNA (708bp) protein (236aa)
ThiF family protein n=1 Tax=Veillonella atypica KON RepID=L1PQ92_9FIRM rbh
ThiF family protein {ECO:0000313|EMBL:EKY17909.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
UBA/THIF-type NAD/FAD binding protein
NECEvent2014_5_8_scaffold_39_5
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3572..3946)
DNA (375bp) protein (125aa)
Glyoxalase family protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCB7_9FIRM
Glyoxalase family protein {ECO:0000313|EMBL:EFR60962.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon
glyoxalase/bleomycin resistance protein/dioxygenase
NECEvent2014_5_8_scaffold_39_6
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4026..7109)
DNA (3084bp) protein (1028aa)
Exonuclease SbcCD, C subunit n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCB8_9FIRM rbh
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:EFR60719.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral tax
DNA repair ATPase-like protein
NECEvent2014_5_8_scaffold_39_7
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7110..8480)
DNA (1371bp) protein (457aa)
Exonuclease SbcCD, D subunit n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCB9_9FIRM rbh
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EFR60858.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral tax
nuclease SbcCD subunit D
NECEvent2014_5_8_scaffold_39_8
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8567..9403)
DNA (837bp) protein (279aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCC0_9FIRM rbh
apurinic endonuclease Apn1
NECEvent2014_5_8_scaffold_39_9
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9548..9967)
DNA (420bp) protein (140aa)
Transcriptional regulator, Fur family n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCC1_9FIRM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EFR60647.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
Fur family ferric uptake regulator
NECEvent2014_5_8_scaffold_39_10
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10139..11710)
DNA (1572bp) protein (524aa)
DEAD/DEAH box helicase {ECO:0000313|EMBL:EFR60905.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFR60905.1};; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonell
DEAD/DEAH box helicase n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCC2_9FIRM rbh
DEAD/DEAH box helicase
NECEvent2014_5_8_scaffold_39_11
Veillonella sp. DORA_B_18_19_23, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11819..12214)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KKE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI96744.1}; TaxID=1403933 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_B_18_19
NECEvent2014_5_8_scaffold_39_12
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12490..13065
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCC3_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EFR60777.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 15
hypothetical protein
NECEvent2014_5_8_scaffold_39_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13135..13599)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNN8_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP66496.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748
NECEvent2014_5_8_scaffold_39_14
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13692..14642)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCC6_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EFR60947.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 15
hypothetical protein
NECEvent2014_5_8_scaffold_39_15
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14790..16274)
DNA (1485bp) protein (495aa)
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:EEP66493.1}; EC=1.2.1.- {ECO:0000313|EMBL:EEP66493.1};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillo
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNN5_9FIRM rbh
aldehyde dehydrogenase
NECEvent2014_5_8_scaffold_39_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16550..18874)
DNA (2325bp) protein (775aa)
Tex-like protein N-terminal domain protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNN4_9FIRM rbh
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:EEP66492.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonell
RNA binding S1 domain-containing protein
NECEvent2014_5_8_scaffold_39_17
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18871..19365)
DNA (495bp) protein (165aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veil
UPI0003D5BD7E related cluster n=1 Tax=unknown RepID=UPI0003D5BD7E rbh
dihydrofolate reductase subunit
NECEvent2014_5_8_scaffold_39_18
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19497..20360)
DNA (864bp) protein (288aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
UPI0003D6853E related cluster n=1 Tax=unknown RepID=UPI0003D6853E rbh
thymidylate synthase
NECEvent2014_5_8_scaffold_39_19
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20403..22268)
DNA (1866bp) protein (622aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EFR60742.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFR60742.1};; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; V
ATP-dependent DNA helicase RecQ n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBB3_9FIRM rbh
ATP-dependent DNA helicase RecQ
NECEvent2014_5_8_scaffold_39_20
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22534..24021
DNA (1488bp) protein (496aa)
UPI0003D5D66B related cluster n=1 Tax=unknown RepID=UPI0003D5D66B rbh
Sodium/proline symporter {ECO:0000313|EMBL:ETJ12053.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16
sodium/proline symporter
NECEvent2014_5_8_scaffold_39_21
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24076..25104)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBB6_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EFR60663.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 15
transcriptional regulator
NECEvent2014_5_8_scaffold_39_22
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25456..27072)
DNA (1617bp) protein (539aa)
UPI0003D5C527 related cluster n=1 Tax=unknown RepID=UPI0003D5C527 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ12051.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_
type 12 methyltransferase
NECEvent2014_5_8_scaffold_39_23
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27277..30813)
DNA (3537bp) protein (1179aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonella
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBB8_9FIRM rbh
pyruvate ferredoxin/flavodoxin oxidoreductase
NECEvent2014_5_8_scaffold_39_24
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31200..32123
DNA (924bp) protein (308aa)
LysR substrate binding domain protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBB9_9FIRM rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EFR60668.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
LysR family transcriptional regulator
NECEvent2014_5_8_scaffold_39_25
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32123..32542
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR60809.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 15
hypothetical protein
NECEvent2014_5_8_scaffold_39_26
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32693..34006)
DNA (1314bp) protein (438aa)
Transporter, major facilitator family protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBC2_9FIRM rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFR60920.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillon
major facilitator superfamily protein
NECEvent2014_5_8_scaffold_39_27
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(34247..34621)
DNA (375bp) protein (125aa)
Putative cupin region n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KKD1_9FIRM
Putative cupin region {ECO:0000313|EMBL:EFG23340.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
cupin
Displaying items 1-30 of 92 in total

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