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NECEvent2014_5_8_scaffold_42_30

Organism: NECEvent2014_5_8_Enterobacteriales_53_56_partial

partial RP 18 / 55 MC: 2 BSCG 14 / 51 ASCG 10 / 38 MC: 2
Location: comp(29787..30461)

Top 3 Functional Annotations

Value Algorithm Source
MarC integral membrane family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HDI7_SHIFL similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 221.0
  • Bit_score: 390
  • Evalue 1.30e-105
  • rbh
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 220.0
  • Bit_score: 392
  • Evalue 3.60e-106
multiple antibiotic resistance (MarC)-like protein similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 222.0
  • Bit_score: 389
  • Evalue 4.70e-106

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Taxonomy

Citrobacter amalonaticus → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGATGGATTTATTGAAAGTAATTGGCCTTGGACTGGTGGTGATACTGCCTTTGGCAAACCCGCTCACCACCGTTGCGCTCTTTTTAGGGCTCGCGGGCAATATGAACAGCGCCCAGCGCAATCACCAGTCGCTGATGGCCTCTGTCTATGTCTTTGCCATCATGATGGTGGCCTATTATGCCGGGCAAGTGGTGATGAACACCTTCGGGATTTCAATTCCGGGGTTGCGTATCGCCGGTGGGCTTATTGTGGCCTTTATCGGCTTTCGTATGCTTTTCCCGCCGCAGAAAATGCATGAAGCGCCGGAGATCAAAACCAAATCGGAAGAGCTGGAAGACGAACCGACGGCCAATATCGCTTTCGTGCCCTTAGCGATGCCGAGTACTGCCGGGCCGGGGACGATTGCGATGATCATCAGTTCCGCGTCGACCGTGCGCGAAAGCAGCGCCTTCCCTGAATGGGTGTTGTGGATTGCGCCACCGCTGATTTTCGCCACCGTGGCGGTGATCCTGTGGGGATGTCTGCGCAGTTCCGGGGCGATAATGCGGCTGGTAGGAAAGGGTGGAATTGAGGCTATTTCTCGTCTGATGGGCTTTTTGCTGGTCTGTATGGGGGTGCAATTTATCATTAATGGCGTGCTGGAAATCATTACGACCTACCACGCCGCTGCCTGA
PROTEIN sequence
Length: 225
MMDLLKVIGLGLVVILPLANPLTTVALFLGLAGNMNSAQRNHQSLMASVYVFAIMMVAYYAGQVVMNTFGISIPGLRIAGGLIVAFIGFRMLFPPQKMHEAPEIKTKSEELEDEPTANIAFVPLAMPSTAGPGTIAMIISSASTVRESSAFPEWVLWIAPPLIFATVAVILWGCLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGVLEIITTYHAAA*