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NECEvent2014_5_8_scaffold_46_26

Organism: NECEvent2014_5_8_Enterobacteriales_53_56_partial

partial RP 18 / 55 MC: 2 BSCG 14 / 51 ASCG 10 / 38 MC: 2
Location: comp(22433..23335)

Top 3 Functional Annotations

Value Algorithm Source
Permease component of ABC-type sugar transporter n=1 Tax=Acidovorax sp. CF316 RepID=J1EH59_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 290.0
  • Bit_score: 426
  • Evalue 1.70e-116
  • rbh
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27902.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 290.0
  • Bit_score: 436
  • Evalue 2.90e-119
binding-protein-dependent transporters inner membrane component similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 290.0
  • Bit_score: 423
  • Evalue 5.20e-116

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGGCACAACTCAAAAGCTGGCGTCAGCGCCAGCATTACGCCTGGCTGCTGGGGTTATCGCCGTCGCTTGTGGTGCTGACGCTGTTAACCCTGGTCCCGGCGGCGGCGCTGCTGGTCACCAGCCTCACGCCGTTCAGCCTGACTAACCCGGAAGCGACATTCACCTTTAGTAACCCACTGGTGAACTATCAGCAGTTGCTGCATGACGACCGCTTTCTCAACTCGTTGGTGACGCAGCTTAAGCTATCGGTGGTGAGTGTCTTCTTCCAGGTGCTGATCGGACTGCTGCTGGCGCTGCTGCTGAATGGCTCATCGCGGCTGCTCAACGGGGTGCGTACTTTGTTGCTCATCCCTATGGTACTGCCGCCGATTATCGTGGCGCTGATCTGGAAAATTATCTACACCCCGGACATCAGCCCGCTGCACCAAATTCTGGAGCGCATCAACCTGCCGCTGAACTCGCTTATCGCCAACCCGGACACCGCGCTATGGGCGATAGTGGTGGCCGACGTCTGGCAGTGGTTTCCGTTCACCATGTTGATGGTGCTGGCGGCCCTGCAAATGGTGCCCAACGAACCGCGCGAAGCGGCAAGCCTCGACGGTGCCTCGTCGTTCAACATCTTCCGCTACATCGTATTGCCGCACCTCAAACCGGTGCTGGCGGTGTGCATTCTGTTTCGTCTGATCGACAGCTTCAAAGCCTTTCCGCTGATTTACATCCTCACGGACGGCGGACCGGGCTCGGTGACAGAAGTCACTAACTACTACGGTTTTATTCAGGCTTTTAACTTTTCCTGGTGGGGATACGGCAGCGCCATCGCGGTGGTGATCCTGGGCGGGGTGTTTATTTTAAGCTGGCTGATTGGCCGTGCGGGGTGGAATGATGACAGTACAGCACACTGA
PROTEIN sequence
Length: 301
MAQLKSWRQRQHYAWLLGLSPSLVVLTLLTLVPAAALLVTSLTPFSLTNPEATFTFSNPLVNYQQLLHDDRFLNSLVTQLKLSVVSVFFQVLIGLLLALLLNGSSRLLNGVRTLLLIPMVLPPIIVALIWKIIYTPDISPLHQILERINLPLNSLIANPDTALWAIVVADVWQWFPFTMLMVLAALQMVPNEPREAASLDGASSFNIFRYIVLPHLKPVLAVCILFRLIDSFKAFPLIYILTDGGPGSVTEVTNYYGFIQAFNFSWWGYGSAIAVVILGGVFILSWLIGRAGWNDDSTAH*