ggKbase home page

NECEvent2014_5_8_scaffold_1090_1

Organism: NECEvent2014_5_8_Escherichia_coli_45_16_hint

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 2..151

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Escherichia coli 07798 RepID=K3IJ75_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 49.0
  • Bit_score: 96
  • Evalue 6.50e-18
rpoS; RNA polymerase sigma factor RpoS similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 49.0
  • Bit_score: 96
  • Evalue 1.80e-18
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=149539 species="Bacteria; Proteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 49.0
  • Bit_score: 96
  • Evalue 9.00e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salmonella enterica → Salmonella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 150
GGGTACGAAGCGGCAACACTGGAAGATGTAGGTCGTGAAATTGGCCTCACCCGTGAACGTGTTCGCCAGATTCAGGTTGAAGGCCTGCGCCGTTTGCGTGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCTGTTCCGCGAGTAA
PROTEIN sequence
Length: 50
GYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE*