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NECEvent2014_5_8_scaffold_1090

Alias: 175_008_scaffold_1090

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_1090_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..151
DNA (150bp) protein (50aa)
RNA polymerase sigma factor n=1 Tax=Escherichia coli 07798 RepID=K3IJ75_ECOLX
rpoS; RNA polymerase sigma factor RpoS
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=149539 species="Bacteria; Proteobacteri
NECEvent2014_5_8_scaffold_1090_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(245..1609)
DNA (1365bp) protein (455aa)
Transporter, gluconate:H+ symporter family n=10 Tax=Escherichia coli RepID=D7Y5T9_ECOLX rbh
Inner membrane permease ygbN {ECO:0000313|EMBL:EOW04647.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
inner membrane permease YgbN
NECEvent2014_5_8_scaffold_1090_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1698..2474)
DNA (777bp) protein (259aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
Hydroxypyruvate isomerase n=4 Tax=Escherichia coli RepID=L3I2P2_ECOLX rbh
putative endonuclease
NECEvent2014_5_8_scaffold_1090_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2479..3117)
DNA (639bp) protein (213aa)
Putative aldolase class 2 protein YgbL n=592 Tax=Enterobacteriaceae RepID=YGBL_ECOLI rbh
ygbL; putative aldolase
Aldolase {ECO:0000313|EMBL:EZE25846.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 st
NECEvent2014_5_8_scaffold_1090_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3114..4376)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=M2NLN4_ECOLX rbh
Membrane protein {ECO:0000313|EMBL:EYZ96717.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O11
hypothetical protein
NECEvent2014_5_8_scaffold_1090_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4373..5281)
DNA (909bp) protein (303aa)
NAD binding domain of 6-phosphogluconate dehydrogenase n=408 Tax=Enterobacteriaceae RepID=A7ZQH6_ECO24 rbh
dehydrogenase
Oxidoreductase {ECO:0000313|EMBL:EZE25848.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:
NECEvent2014_5_8_scaffold_1090_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5477..6244
DNA (768bp) protein (256aa)
Uncharacterized HTH-type transcriptional regulator YgbI n=122 Tax=Escherichia RepID=YGBI_ECOLI rbh
ygbI; putative DNA-binding transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EFJ96983.1}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_5_8_scaffold_1090_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6295..6951)
DNA (657bp) protein (219aa)
Serine/threonine-protein phosphatase 2 n=19 Tax=Escherichia coli RepID=D7Y5U5_ECOLX rbh
Serine/threonine-protein phosphatase 2 {ECO:0000313|EMBL:EOW16914.1}; TaxID=1182704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
serine/threonine-specific protein phosphatase 2 rbh
NECEvent2014_5_8_scaffold_1090_9
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7057..7743)
DNA (687bp) protein (229aa)
DNA mismatch repair protein MutS n=1 Tax=Escherichia coli P0305260.10 RepID=N4DPH9_ECOLX
DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
Displaying 9 items

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