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NECEvent2014_5_8_scaffold_223

Alias: 175_008_scaffold_223

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_223_1
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


236..544
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=19 Tax=Clostridium RepID=RS10_CLOB1
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 36
NECEvent2014_5_8_scaffold_223_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


634..1263
DNA (630bp) protein (210aa)
50S ribosomal protein L3 n=2 Tax=Clostridium RepID=J7TEM6_CLOSG rbh
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_5_8_scaffold_223_3
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1288..1908
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TA70_CLOSG rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15
rplD; 50S ribosomal protein L4
NECEvent2014_5_8_scaffold_223_4
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1908..2201
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SXH6_CLOSG
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rplW; 50S ribosomal protein L23
NECEvent2014_5_8_scaffold_223_5
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2256..3089
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T346_CLOSG rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15
rplB; 50S ribosomal protein L2
NECEvent2014_5_8_scaffold_223_6
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3158..3442
DNA (285bp) protein (95aa)
30S ribosomal protein S19 n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F358_CLOSG
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 1
rpsS; 30S ribosomal protein S19
NECEvent2014_5_8_scaffold_223_7
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3464..3799
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TEN1_CLOSG
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rplV; 50S ribosomal protein L22
NECEvent2014_5_8_scaffold_223_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3817..4488
DNA (672bp) protein (224aa)
30S ribosomal protein S3 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TA75_CLOSG rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.
rpsC; 30S ribosomal protein S3 rbh
NECEvent2014_5_8_scaffold_223_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4506..4949
DNA (444bp) protein (148aa)
50S ribosomal protein L16 n=18 Tax=Clostridium RepID=RL16_CLOB1
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1302425 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_5_8_scaffold_223_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4939..5151
DNA (213bp) protein (71aa)
50S ribosomal protein L29 n=16 Tax=Clostridium RepID=RL29_CLOB1
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum Prevot
NECEvent2014_5_8_scaffold_223_11
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5173..5427
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=2 Tax=Clostridium sporogenes RepID=G9F353_CLOSG
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 36
rpsQ; 30S ribosomal protein S17
NECEvent2014_5_8_scaffold_223_12
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5462..5830
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=19 Tax=Clostridium RepID=RL14_CLOB1
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_5_8_scaffold_223_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5854..6171
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=5 Tax=Clostridium RepID=RL24_CLOB6
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_14
NECEvent2014_5_8_scaffold_223_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6194..6736
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=17 Tax=Clostridium RepID=RL5_CLOB1 rbh
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=515621 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain
NECEvent2014_5_8_scaffold_223_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6753..6938
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=16 Tax=Clostridium RepID=RS14Z_CLOB1
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000255|HAMAP-Rule:MF_01364}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum
NECEvent2014_5_8_scaffold_223_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6968..7366
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=5 Tax=Clostridium RepID=RS8_CLOB6
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_143
NECEvent2014_5_8_scaffold_223_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7390..7932
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F347_CLOSG rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rplF; 50S ribosomal protein L6
NECEvent2014_5_8_scaffold_223_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7951..8310
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TA82_CLOSG
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450
rplR; 50S ribosomal protein L18
NECEvent2014_5_8_scaffold_223_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8328..8825
DNA (498bp) protein (166aa)
30S ribosomal protein S5 n=15 Tax=Clostridium RepID=RS5_CLOB1 rbh
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_5_8_scaffold_223_20
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8839..9018
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=15 Tax=Clostridium RepID=RL30_CLOB1
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_5_8_scaffold_223_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9038..9478
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=2 Tax=Clostridium botulinum F RepID=RL15_CLOBL
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain
NECEvent2014_5_8_scaffold_223_22
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9479..10756
DNA (1278bp) protein (426aa)
Protein translocase subunit SecY n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TEP9_CLOSG rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
secY; preprotein translocase subunit SecY
NECEvent2014_5_8_scaffold_223_23
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10780..11430
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=4 Tax=Clostridium RepID=G9F341_CLOSG rbh
NECEvent2014_5_8_scaffold_223_24
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11430..12179
DNA (750bp) protein (250aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
map-1; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SXI4_CLOSG rbh
NECEvent2014_5_8_scaffold_223_25
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12194..12538
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F339_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:EDU39060.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
hypothetical protein
NECEvent2014_5_8_scaffold_223_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12483..12701
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=20 Tax=Clostridium RepID=IF1_CLOB1
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1232189 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulin
NECEvent2014_5_8_scaffold_223_27
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12718..12831
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=189 Tax=Firmicutes RepID=RL36_CLOAB
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_5_8_scaffold_223_28
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12939..13310
DNA (372bp) protein (124aa)
30S ribosomal protein S13 n=18 Tax=Clostridium RepID=RS13_CLOB1
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 36
NECEvent2014_5_8_scaffold_223_29
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13328..13726
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=2 Tax=Clostridium sporogenes RepID=G9F335_CLOSG
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 1
rpsK; 30S ribosomal protein S11
NECEvent2014_5_8_scaffold_223_30
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13761..14381
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=2 Tax=Clostridium sporogenes RepID=G9F334_CLOSG rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15
rpsD; 30S ribosomal protein S4
Displaying items 1-30 of 47 in total

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