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NECEvent2014_5_8_scaffold_237

Alias: 175_008_scaffold_237

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_237_1
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(138..1223)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T3F9_CLOSG rbh
Uncharacterized protein {ECO:0000313|EMBL:EDU39180.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
hypothetical protein rbh
NECEvent2014_5_8_scaffold_237_2
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1533..2426)
DNA (894bp) protein (298aa)
BadF/BadG/BcrA/BcrD ATPase family protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SXP1_CLOSG rbh
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:EDU39179.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporo
BadF/BadG/BcrA/BcrD ATPase rbh
NECEvent2014_5_8_scaffold_237_3
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2486..2782)
DNA (297bp) protein (99aa)
PTS system lactose/cellobiose-specific transporter subunit IIA n=2 Tax=Clostridium sporogenes RepID=G9EYN1_CLOSG
PTS system lactose/cellobiose-specific transporter subunit IIA {ECO:0000313|EMBL:EHN15853.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
PTS system lactose/cellobiose-specific family transporter subunit IIA
NECEvent2014_5_8_scaffold_237_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2977..3285)
DNA (309bp) protein (103aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TF45_CLOSG
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22253.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
PTS system lactose/cellobiose-specific transporter subunit IIB
NECEvent2014_5_8_scaffold_237_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3405..6134)
DNA (2730bp) protein (910aa)
Sigma-54 interaction domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SHA1_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22254.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
sigma-54 dependent transcriptional regulator
NECEvent2014_5_8_scaffold_237_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6258..7547)
DNA (1290bp) protein (430aa)
Putative PTS system, cellobiose-specific IIC component n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T3F5_CLOSG rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.;"
PTS system lactose/cellobiose family transporter subunit IIC
NECEvent2014_5_8_scaffold_237_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7629..8966)
DNA (1338bp) protein (446aa)
6-phospho-beta-glucosidase (EC:3.2.1.86) rbh
Family 4 glycosyl hydrolase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SXN9_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22256.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
NECEvent2014_5_8_scaffold_237_8
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9764..9994
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TAK5_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:EDU39173.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
phage integrase site specific recombinase
NECEvent2014_5_8_scaffold_237_9
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10168..10548)
DNA (381bp) protein (127aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00464}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00464};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00464};; EC=4.1.1.50 {ECO:0000
S-adenosylmethionine decarboxylase (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TF40_CLOSG
NECEvent2014_5_8_scaffold_237_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10672..11868)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SHA0_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22258.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hypothetical protein rbh
NECEvent2014_5_8_scaffold_237_11
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12237..12437)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T3F3_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:EDU39170.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
NECEvent2014_5_8_scaffold_237_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12591..12866)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SXN6_CLOSG
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22260.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hypothetical protein
NECEvent2014_5_8_scaffold_237_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13446..14480)
DNA (1035bp) protein (345aa)
Ribosomal RNA large subunit methyltransferase Cfr {ECO:0000256|HAMAP-Rule:MF_01873}; EC=2.1.1.224 {ECO:0000256|HAMAP-Rule:MF_01873};; 23S rRNA (adenine(2503)-C(8))-methyltransferase {ECO:0000256|HAMAP
Ribosomal RNA large subunit methyltransferase Cfr n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TAK1_CLOSG rbh
chloramphenicol/florfenicol resistance protein rbh
NECEvent2014_5_8_scaffold_237_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14643..16121)
DNA (1479bp) protein (493aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TF36_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22262.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
drug resistance ABC transporter ATP-binding protein
NECEvent2014_5_8_scaffold_237_15
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16632..17006)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SH99_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:EDU39166.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
intron RNA domain IV
NECEvent2014_5_8_scaffold_237_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17067..17801)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T3F0_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22264.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hypothetical protein rbh
NECEvent2014_5_8_scaffold_237_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17808..20042)
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SXN4_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22265.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hypothetical protein rbh
NECEvent2014_5_8_scaffold_237_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20043..20921)
DNA (879bp) protein (293aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TAJ8_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22266.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
ABC transporter related protein rbh
NECEvent2014_5_8_scaffold_237_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21233..22216)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TF33_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22267.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hypothetical protein
NECEvent2014_5_8_scaffold_237_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22339..24915)
DNA (2577bp) protein (859aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SH98_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22268.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hypothetical protein
NECEvent2014_5_8_scaffold_237_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24912..25595)
DNA (684bp) protein (228aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T3E7_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22269.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
ABC transporter related protein
NECEvent2014_5_8_scaffold_237_22
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25678..26697)
DNA (1020bp) protein (340aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
resE; sensor protein resE (EC:2.7.3.-) rbh
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SXN2_CLOSG rbh
NECEvent2014_5_8_scaffold_237_23
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26654..27340)
DNA (687bp) protein (229aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TAJ1_CLOSG rbh
Response regulator receiver domain protein {ECO:0000313|EMBL:EDU39158.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium spor
response regulator
NECEvent2014_5_8_scaffold_237_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27347..27541)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TF29_CLOSG
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22272.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
transposase
NECEvent2014_5_8_scaffold_237_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28083..29468)
DNA (1386bp) protein (462aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T3E3_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22273.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
Displaying 25 items

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