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NECEvent2014_5_8_scaffold_345

Alias: 175_008_scaffold_345

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_345_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

283..657
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AAB2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33353.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_5_8_scaffold_345_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

958..1257
DNA (300bp) protein (100aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS80_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85349.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_5_8_scaffold_345_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1823..2770
DNA (948bp) protein (316aa)
2-dehydro-3-deoxygluconate kinase {ECO:0000313|EMBL:KJZ85326.1}; EC=2.7.1.45 {ECO:0000313|EMBL:KJZ85326.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
2-keto-3-deoxygluconate kinase n=4 Tax=Clostridium butyricum RepID=B1QS78_CLOBU rbh
ribokinase-like domain-containing protein
NECEvent2014_5_8_scaffold_345_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2793..3425
DNA (633bp) protein (211aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0X9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85331.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
NECEvent2014_5_8_scaffold_345_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3802..4353
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AKP0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33349.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_5_8_scaffold_345_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4415..4846)
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QS75_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33348.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_5_8_scaffold_345_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5160..5990
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JM57_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85337.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_5_8_scaffold_345_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6251..7117
DNA (867bp) protein (289aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBR4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97423.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
transcriptional regulator
NECEvent2014_5_8_scaffold_345_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7399..8724
DNA (1326bp) protein (442aa)
Mate efflux family protein n=2 Tax=Clostridium butyricum RepID=M8KFP4_CLOBU rbh
MATE efflux family protein {ECO:0000313|EMBL:ENZ33345.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mate efflux family protein
NECEvent2014_5_8_scaffold_345_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8749..9501
DNA (753bp) protein (251aa)
4-carboxymuconolactone decarboxylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7F2_CLOBU rbh
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pump {ECO:0000313|EMBL:KJZ97425.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein
NECEvent2014_5_8_scaffold_345_11
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10115..10717
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1 RepID=C3GUS3_BACTU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJG79594.1}; TaxID=1428 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis.;"
NECEvent2014_5_8_scaffold_345_12
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10718..12616
DNA (1899bp) protein (633aa)
Uncharacterized protein n=1 Tax=Bacillus cereus G9241 RepID=Q4MV17_BACCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJG79456.1}; TaxID=1428 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis.;"
NECEvent2014_5_8_scaffold_345_13
Bacillus xiamenensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12707..12928
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Bacillus sp. HYC-10 RepID=K2MH63_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EKF34653.1}; TaxID=1178537 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus xiamenensis.;"
hypothetical protein
NECEvent2014_5_8_scaffold_345_14
Pseudomonas avellanae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13131..13289
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WRA1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKG29680.1}; TaxID=1154758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas avell
NECEvent2014_5_8_scaffold_345_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13351..14529)
DNA (1179bp) protein (393aa)
Site-specific recombinase XerD n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5G5_9CLOT rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:EKQ56202.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley
phage integrase family protein
NECEvent2014_5_8_scaffold_345_16
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14594..15268)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y6E8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03377.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
transcriptional regulator, XRE family
NECEvent2014_5_8_scaffold_345_17
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15428..15655
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XUI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03378.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
helix-turn-helix family protein
NECEvent2014_5_8_scaffold_345_18
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15662..15883
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUF8_9CLOT
DNA binding domain, excisionase family
Uncharacterized protein {ECO:0000313|EMBL:EKQ56205.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-2
NECEvent2014_5_8_scaffold_345_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15915..16079
DNA (165bp) protein (55aa)
DNA binding domain, excisionase family protein n=2 Tax=Clostridium botulinum B RepID=B2TKJ8_CLOBB
DNA binding domain, excisionase family protein
DNA binding domain, excisionase family protein {ECO:0000313|EMBL:ACD22639.1}; Putative HTH DNA-binding protein {ECO:0000313|EMBL:CDH89521.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Cl
NECEvent2014_5_8_scaffold_345_20

Not on your lists

16134..16271
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0APU2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ21936.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_8_scaffold_345_21

Not on your lists

16249..17319
DNA (1071bp) protein (357aa)
DnaD domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2H3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ21935.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
phage replisome organizer, putative, N-terminal region
NECEvent2014_5_8_scaffold_345_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17300..17995
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z375_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34110.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
DNA replication protein
NECEvent2014_5_8_scaffold_345_23

Not on your lists

18050..18289
DNA (240bp) protein (80aa)
AbrB family transcriptional regulator n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMV8_CLOBU
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ETJ21933.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
AbrB family transcriptional regulator
NECEvent2014_5_8_scaffold_345_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18311..19027
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACK5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34108.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
BRO domain protein
NECEvent2014_5_8_scaffold_345_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19205..19681)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0APT7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34107.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_5_8_scaffold_345_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19822..21924
DNA (2103bp) protein (701aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QSE4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP52303.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_5_8_scaffold_345_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22021..22152)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z4V2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34921.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying 27 items

View Taxonomy