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NECEvent2014_5_8_scaffold_346

Alias: 175_008_scaffold_346

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_346_1
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1552
DNA (1551bp) protein (517aa)
Mg chelatase-like protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SZT5_CLOSG rbh
Mg chelatase-like protein {ECO:0000313|EMBL:EDU36395.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579
Mg(2+) chelatase family protein / ComM-related protein rbh
NECEvent2014_5_8_scaffold_346_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1568..1939
DNA (372bp) protein (124aa)
UPF0102 protein CLOSPO_02562 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SUB2_CLOSG
UPF0102 protein N495_12010 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 45
hypothetical protein
NECEvent2014_5_8_scaffold_346_3
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2197..3006)
DNA (810bp) protein (270aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4) rbh
Ribonuclease HII n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T4G8_CLOSG rbh
NECEvent2014_5_8_scaffold_346_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3116..4015)
DNA (900bp) protein (300aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T926_CLOSG rbh
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 45
rbgA; ribosomal biogenesis GTPase
NECEvent2014_5_8_scaffold_346_5
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4315..4839)
DNA (525bp) protein (175aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
lepB-2; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Clostridium sporogenes RepID=G9EXY3_CLOSG rbh
NECEvent2014_5_8_scaffold_346_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4898..5242)
DNA (345bp) protein (115aa)
50S ribosomal protein L19 n=2 Tax=Clostridium sporogenes RepID=G9EXY2_CLOSG
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rplS; 50S ribosomal protein L19
NECEvent2014_5_8_scaffold_346_7
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5394..6116)
DNA (723bp) protein (241aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SUB0_CLOSG rbh
NECEvent2014_5_8_scaffold_346_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6107..6601)
DNA (495bp) protein (165aa)
Ribosome maturation factor RimM n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T4G5_CLOSG rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
rimM; 16S rRNA-processing protein RimM
NECEvent2014_5_8_scaffold_346_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6717..6944)
DNA (228bp) protein (76aa)
UPF0109 protein CBO2447 n=19 Tax=Clostridium RepID=A5I4M5_CLOBH
hypothetical protein
UPF0109 protein CBB2_3402 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_5_8_scaffold_346_10
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6965..7213)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SFP3_CLOSG
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 1
rpsP; 30S ribosomal protein S16
NECEvent2014_5_8_scaffold_346_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7244..8593)
DNA (1350bp) protein (450aa)
Signal recognition particle protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SZT1_CLOSG rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
ffh; signal recognition particle protein
NECEvent2014_5_8_scaffold_346_12
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8606..8938)
DNA (333bp) protein (111aa)
UPF0122 protein CLOSPO_02552 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SUA9_CLOSG
UPF0122 protein CLOSPO_02552 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATC
DNA-binding protein
NECEvent2014_5_8_scaffold_346_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9278..10189)
DNA (912bp) protein (304aa)
Signal recognition particle receptor FtsY n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T4G2_CLOSG rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridial
ftsY; signal recognition particle-docking protein FtsY
NECEvent2014_5_8_scaffold_346_14
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10218..13799)
DNA (3582bp) protein (1194aa)
Chromosome partition protein Smc n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T918_CLOSG rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes
smc; chromosome segregation protein SMC rbh
NECEvent2014_5_8_scaffold_346_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13812..13943)
DNA (132bp) protein (44aa)
Uncharacterized protein n=13 Tax=Clostridium RepID=A7FW17_CLOB1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS39957.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Lange
NECEvent2014_5_8_scaffold_346_16
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14063..15154)
DNA (1092bp) protein (364aa)
Putative radical SAM protein, TIGR01210 family n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SZS9_CLOSG rbh
Putative radical SAM protein, TIGR01210 family {ECO:0000313|EMBL:EDU36380.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
radical SAM domain-containing protein
NECEvent2014_5_8_scaffold_346_17
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15147..15851)
DNA (705bp) protein (235aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SUA7_CLOSG rbh
NECEvent2014_5_8_scaffold_346_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15976..16209)
DNA (234bp) protein (78aa)
Acyl carrier protein n=19 Tax=Clostridium RepID=A5I4N3_CLOBH
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=498213 species="Bacteria; Firmicutes; Clostridia; Clostridial
NECEvent2014_5_8_scaffold_346_19
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16287..17294)
DNA (1008bp) protein (336aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T914_CLOSG rbh
plsX; putative glycerol-3-phosphate acyltransferase PlsX rbh
NECEvent2014_5_8_scaffold_346_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17385..17567)
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=16 Tax=Clostridium RepID=A7FW22_CLOB1
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=441771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain
NECEvent2014_5_8_scaffold_346_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17581..18081)
DNA (501bp) protein (167aa)
Putative ACR, COG1399 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SZS7_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS24284.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
ribosomal protein L32 family protein rbh
NECEvent2014_5_8_scaffold_346_22
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18199..19410)
DNA (1212bp) protein (404aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia;
ackA; acetate kinase (EC:2.7.2.1) rbh
Acetate kinase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SUA5_CLOSG rbh
NECEvent2014_5_8_scaffold_346_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19531..20529)
DNA (999bp) protein (333aa)
phosphate acetyltransferase (EC:2.3.1.8) rbh
Phosphate acetyltransferase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T4F6_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS24286.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
NECEvent2014_5_8_scaffold_346_24
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20863..21438)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T910_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:EDU36372.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
hypothetical protein
NECEvent2014_5_8_scaffold_346_25
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21460..21957
DNA (498bp) protein (166aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilacea
Glycerol-3-phosphate dehydrogenase n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0G5_FINMA
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
Displaying 25 items

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