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NECEvent2014_5_8_scaffold_60_14

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 15867..18044

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1379739 species="Bacteria; Firmicutes; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 725.0
  • Bit_score: 1449
  • Evalue 0.0
Ribonuclease R n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T1N5_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 725.0
  • Bit_score: 1442
  • Evalue 0.0
  • rbh
3'-to-5' exoribonuclease RNase R similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 725.0
  • Bit_score: 1428
  • Evalue 0.0

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2178
ATGAAGATAAGAGAAACAATATTAGCTTTTATGGAAGAGCAGGCATATAAACCTATGAATATAAAAGAATTGAAGCAGGTGTTTGGAGTAACTAAACATGAATATAAAGATTTTGAGAAAATGTTAAAGGATATGGAAAAGGACGGACAAATAGTTAAAACAAGAACGGAACACTATGGTATACCAGCCAGAATGGGATTAGTTGTAGGAAAACTTCAAGGACATCAAAAAGGTTATGGATTTGTTATACCAGAAGAAGAAAGAGAAGATATTTTTATACCAGCATCTAGTATGAATGGAGCTATGCATACTGATAGAGTATTAGCTAAAATTACTAAAGAATCAGCTAATGGAAAAAGATGCGAAGGTGAAATAATAAGAATATTAGAAAGAGGCAATAAAACAGTCATAGGCATATACGAAGATAGTAAAAACTTCGGTTTTGTGGTTTCCGATGATAAAAAGATATACCAAGACATATTTATACCAAAGGGAGATAAAAATGGAGCAAAAACAGGTCAAGTAGTTATAGCAGAAATTGTAACCTATCCAGAAAAGAGAAGAAATCCTGAAGGAAGGGTTATAGAAATATTAGGTAATAAAGAAGATAAGGGTATAGATATATTAACCATAATAAAGAAAAATAAATTACCAGAGGAATTCCCACCAAAGGTACAAAGTTATGCAGACAATATATCAGAAGCAATTCCAGAAGAAGAGTATAAAAGAAGGAAAGACTTAAGAGATTTAACTATTGTTACTATAGATGGAGAGGATGCCAAGGATTTAGATGATGCTATATCTTTAGAAAGATTACCTAATGGAAACTATTATTTAGGAGTACATATAGCAGATGTATCTCACTATGTAAAAGAGAAGAATCCACTAGACAAAGAAGCTTTAAAAAGAGCAACTTCAGTATATCTTATAGATAGGGTAATACCAATGCTGCCTAAAAAACTTTCTAATGGAATATGTAGTTTGAACCCTAAAATTGATAGATTAACCTTAAGCTGTTTTATGGAAATAGATAAAAATGGTAAGGTAGTAGATCATAAAGTGGTAGAAAGTATAATAAAAAGCACTGAAAGAATGACTTATACAGATGTAACTAAAATACTAAGAGATGAAGATGAGGAAACTATAAATAAATATAGTAATTTGGTAGATTATTTCAAACTTATGGAGGAACTTTGCAAAATACTTTACAAGAGAAGATTAAAAAGAGGAGCTATAGATTTTGATTTTGAGGAATGTAAAATAATATTAGATGAAAAGGGTAAACCAATAGATATAAAACCTTATGAAAGAGCTATAGCAAACAGAATAATAGAGGAATTTATGCTCGTTTGTAATGAAACCATAGCAGAGCATATGTTCTGGTCTAATTTACCTTTTGTATATAGAACACACGAAGATCCAGATGAAGAAAAATTAATGCATTTTAACGAGTTTGTTCATAACTTAGGGTATGTTATAAGATGGGGTAATGATATTCATCCAAAATCATTGCAAACTATTATAGAAAAAGTAAAAGGAGAAAAAGAAGAAACTGTAGTTAGTACATTACTTTTGCGCTCCTTAAAGCAAGCAAGATATTCTCCAGAATGTATAGGACACTTTGGATTAGCAGCAAGATATTACTGTCACTTTACTTCACCAATAAGGAGATATCCGGACCTTATAATACACAGAATAATAAAAGAATATATAAATGGACAGATTGATGATAAGAGAGCCACAAGGCTTACAACAGAAGTAGAATATGCTTCTAAACAATCTTCAGAAATGGAAAGAGTAGCTCAAGAAGCTGAAAGAGAAGTAGATGATTTAAAGAAAGCAGAATATATGAGTGAAAGAATAGGAGAAGAATACGAAGGAATAATATCCTCAGTAACCAACTTTGGAATGTTTGTAGAACTACCAAATACAATAGAAGGATTAGTTCATATAAGTACATTATCTGATGATTACTATATATATGATGAAAGAAGATTAAGTTTAATTGGAGAAGCTAGCAAAAATATATATAGATTAGGAGATACAGTAAAAATTAAAGTTTCAAAAGTAGATTTATTTAGTCATGAAATATATTTTGATATTATAAAAGATGATGAAGAAGATAAAGAAGAGGCTGAATTTATAGAAGAAACAGAAAAGTATAATACTAATTTATAA
PROTEIN sequence
Length: 726
MKIRETILAFMEEQAYKPMNIKELKQVFGVTKHEYKDFEKMLKDMEKDGQIVKTRTEHYGIPARMGLVVGKLQGHQKGYGFVIPEEEREDIFIPASSMNGAMHTDRVLAKITKESANGKRCEGEIIRILERGNKTVIGIYEDSKNFGFVVSDDKKIYQDIFIPKGDKNGAKTGQVVIAEIVTYPEKRRNPEGRVIEILGNKEDKGIDILTIIKKNKLPEEFPPKVQSYADNISEAIPEEEYKRRKDLRDLTIVTIDGEDAKDLDDAISLERLPNGNYYLGVHIADVSHYVKEKNPLDKEALKRATSVYLIDRVIPMLPKKLSNGICSLNPKIDRLTLSCFMEIDKNGKVVDHKVVESIIKSTERMTYTDVTKILRDEDEETINKYSNLVDYFKLMEELCKILYKRRLKRGAIDFDFEECKIILDEKGKPIDIKPYERAIANRIIEEFMLVCNETIAEHMFWSNLPFVYRTHEDPDEEKLMHFNEFVHNLGYVIRWGNDIHPKSLQTIIEKVKGEKEETVVSTLLLRSLKQARYSPECIGHFGLAARYYCHFTSPIRRYPDLIIHRIIKEYINGQIDDKRATRLTTEVEYASKQSSEMERVAQEAEREVDDLKKAEYMSERIGEEYEGIISSVTNFGMFVELPNTIEGLVHISTLSDDYYIYDERRLSLIGEASKNIYRLGDTVKIKVSKVDLFSHEIYFDIIKDDEEDKEEAEFIEETEKYNTNL*