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NECEvent2014_5_8_scaffold_60

Alias: 175_008_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_60_1
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

155..1258
DNA (1104bp) protein (368aa)
Basic membrane protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T7E5_CLOSG rbh
Basic membrane protein {ECO:0000313|EMBL:EDU37923.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;"
Bmp family lipoprotein
NECEvent2014_5_8_scaffold_60_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1444..2976
DNA (1533bp) protein (511aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TCE2_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25212.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
sugar ABC transporter ATP-binding protein rbh
NECEvent2014_5_8_scaffold_60_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2978..4081
DNA (1104bp) protein (368aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SGK0_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25213.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
sugar ABC transporter permease rbh
NECEvent2014_5_8_scaffold_60_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4074..5000
DNA (927bp) protein (309aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T1P1_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25214.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
sugar ABC transporter permease
NECEvent2014_5_8_scaffold_60_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5112..5837
DNA (726bp) protein (242aa)
Polysaccharide deacetylase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SW27_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25215.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
polysaccharide deacetylase
NECEvent2014_5_8_scaffold_60_6
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6030..7397
DNA (1368bp) protein (456aa)
RNA polymerase sigma-54 factor n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T7E0_CLOSG rbh
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EDU37918.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC
rpoN; RNA polymerase factor sigma-54 rbh
NECEvent2014_5_8_scaffold_60_7
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7834..8865
DNA (1032bp) protein (344aa)
Putative sugar-binding domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TCE0_CLOSG rbh
Putative sugar-binding domain protein {ECO:0000313|EMBL:EDU37917.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogene
cggR; central glycolytic genes regulator
NECEvent2014_5_8_scaffold_60_8
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8943..9950
DNA (1008bp) protein (336aa)
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.-) rbh
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
Glyceraldehyde-3-phosphate dehydrogenase, type I n=4 Tax=Clostridium RepID=C1FQW2_CLOBJ rbh
NECEvent2014_5_8_scaffold_60_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10247..11443
DNA (1197bp) protein (399aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1379739 species="Bacteria;
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T1N8_CLOSG rbh
NECEvent2014_5_8_scaffold_60_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11505..12251
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
tpiA; triosephosphate isomerase (EC:5.3.1.1) rbh
Triosephosphate isomerase n=2 Tax=Clostridium sporogenes RepID=J7SW25_CLOSG rbh
NECEvent2014_5_8_scaffold_60_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12335..13864
DNA (1530bp) protein (510aa)
gpmI; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T7D6_CLOSG rbh
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
NECEvent2014_5_8_scaffold_60_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13920..15215
DNA (1296bp) protein (432aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=2 Tax=Clostridium sporogenes RepID=G9EZE9_CLOSG rbh
NECEvent2014_5_8_scaffold_60_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15425..15658
DNA (234bp) protein (78aa)
Preprotein translocase, SecG subunit n=2 Tax=Clostridium sporogenes RepID=G9EZF0_CLOSG
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25223.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
secG; preprotein translocase subunit SecG
NECEvent2014_5_8_scaffold_60_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15867..18044
DNA (2178bp) protein (726aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1379739 species="Bacteria; Firmicutes; Clostri
Ribonuclease R n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T1N5_CLOSG rbh
3'-to-5' exoribonuclease RNase R
NECEvent2014_5_8_scaffold_60_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18288..19046
DNA (759bp) protein (253aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1379739 spe
surE; stationary phase survival protein SurE (EC:3.1.3.2)
5'-nucleotidase SurE n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EZF2_CLOSG rbh
NECEvent2014_5_8_scaffold_60_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19237..19707
DNA (471bp) protein (157aa)
SsrA-binding protein n=17 Tax=Clostridium RepID=SSRP_CLOB1 rbh
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
smpB; SsrA-binding protein
NECEvent2014_5_8_scaffold_60_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20000..21163)
DNA (1164bp) protein (388aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TCD5_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25227.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
sodium:dicarboxylate symporter family protein
NECEvent2014_5_8_scaffold_60_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22622..23344
DNA (723bp) protein (241aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSP6_9CLOT rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25228.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
two component transcriptional regulator, winged helix family
NECEvent2014_5_8_scaffold_60_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23354..24733
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
Histidine kinase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSP7_9CLOT rbh
histidine kinase rbh
NECEvent2014_5_8_scaffold_60_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24910..27405
DNA (2496bp) protein (832aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSP8_9CLOT rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25230.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
protein of unknown function DUF214
NECEvent2014_5_8_scaffold_60_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27427..28113
DNA (687bp) protein (229aa)
ABC transporter related protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSP9_9CLOT rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25231.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
ABC transporter related protein
NECEvent2014_5_8_scaffold_60_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28628..29689
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XTG5_9CLOT
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25232.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
SAP domain-containing protein
NECEvent2014_5_8_scaffold_60_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29755..33408
DNA (3654bp) protein (1218aa)
Uncharacterized protein n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PB24_DEFDS rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25233.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hypothetical protein
NECEvent2014_5_8_scaffold_60_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33908..34759
DNA (852bp) protein (284aa)
Flagellin protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EZF9_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25234.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
flagellin protein
NECEvent2014_5_8_scaffold_60_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35119..36738
DNA (1620bp) protein (540aa)
PAP2 family protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T7B1_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25235.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
PAP2 family protein rbh
NECEvent2014_5_8_scaffold_60_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37071..37727
DNA (657bp) protein (219aa)
Cupin domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TCC1_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25236.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
mannose-6-phosphate isomerase rbh
NECEvent2014_5_8_scaffold_60_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38047..38730
DNA (684bp) protein (228aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SGJ2_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25237.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
DNA-binding response regulator rbh
NECEvent2014_5_8_scaffold_60_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38799..39806
DNA (1008bp) protein (336aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Clostridium botulinum (strain 657 / Type Ba4) RepID=C3KZ62_CLOB6 rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25238.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
periplasmic sensor signal transduction histidine kinase
NECEvent2014_5_8_scaffold_60_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39881..40645
DNA (765bp) protein (255aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SW10_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25239.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
bacitracin export ATP-binding protein BceA rbh
NECEvent2014_5_8_scaffold_60_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40632..42554
DNA (1923bp) protein (641aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EZG4_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25240.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hypothetical protein rbh
Displaying items 1-30 of 57 in total

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