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NECEvent2014_5_8_scaffold_223_31

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 14449..15396

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 315.0
  • Bit_score: 617
  • Evalue 1.30e-173
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 315.0
  • Bit_score: 615
  • Evalue 9.70e-174
DNA-directed RNA polymerase subunit alpha n=19 Tax=Clostridium RepID=RPOA_CLOB1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 315.0
  • Bit_score: 615
  • Evalue 3.40e-173
  • rbh

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 948
ATGTTAGAAATAGAAAAGCCAAAAATAGAATGTGTTGAAAATGCTGAAGATGGTTCCTATGGTAAATTTGTCATTGAACCATTAGAAAGAGGTTATGGAATAACTCTTGGTAATGCTTTGAGAAGAATTCTTTTATCATCATTACCTGGAGTTGCTGCAGACCATATAAAAATTGATAGTGTTCTTCATGAGTTTTCAACAGTACAAGGTGTAAAAGAGGATGTTACAGAATTAATTCTTAACATCAAATGTTTAGCACTTACTATGAATGGAGAGGGTCCAAAAACTATATATATAGATGAATTTGGACCTAAAGAAGTTACAGCAGCTGATATCAAAACAGACGGAGATGTTGAAGTAATAAACAAAGATTTACATATAGCAACCCTTGACGAAAATGGTAAAATGTATATGGAAATCAACGTTAATCGTGGTAGGGGCTATGTAACTCAAAATAAAAACAAAACTAAGGATATGTCAATAGGAAGTATAGCAGTGGATTCAATTTATACACCTGTTAAAAGAGTTAACTTTTCCGTTGAAAATACTAGAGTTGGCCAAATAACAGACTATGATAAATTGACTATAGAAGTTTGGACTAATGGAACTATAAGACCAGAAGAAGCTGTAAGTTTATCAGCTAAAATTCTTATAGAGCACTTTAAGTTATTTATGACTTTAACTGATCATGCAGATGATATGGAAATCATGGTTGAAAAAGAAGAAGATAAGAAAGAAAAGGTTCTAGAAATGACAATTGAAGAGCTAGATCTTTCAGTAAGAAGTTATAACTGCTTAAAGAGAGCTGGAATAAATACAGTTCAAGAACTATGCGAAAGAAGCATGGATGATATGATGAAAGTTAGAAACCTTGGTAAAAAGTCCTTAGAAGAAGTAGAACAAAAGTTAGAAGCTTTAGGATTAGGTTTAAGAAAAAGTGAAGATTAG
PROTEIN sequence
Length: 316
MLEIEKPKIECVENAEDGSYGKFVIEPLERGYGITLGNALRRILLSSLPGVAADHIKIDSVLHEFSTVQGVKEDVTELILNIKCLALTMNGEGPKTIYIDEFGPKEVTAADIKTDGDVEVINKDLHIATLDENGKMYMEINVNRGRGYVTQNKNKTKDMSIGSIAVDSIYTPVKRVNFSVENTRVGQITDYDKLTIEVWTNGTIRPEEAVSLSAKILIEHFKLFMTLTDHADDMEIMVEKEEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELCERSMDDMMKVRNLGKKSLEEVEQKLEALGLGLRKSED*