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NECEvent2014_5_8_scaffold_541_10

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 10280..10855

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:EDU37613.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EDU37613.1};; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 376
  • Evalue 1.80e-101
RNA polymerase factor sigma-70 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 177.0
  • Bit_score: 151
  • Evalue 3.10e-34
RNA polymerase factor sigma-70 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T6T9_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 376
  • Evalue 1.30e-101
  • rbh

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 576
ATGAAGGTACCTTTAGAAGGGATGGAGAAGATGATAAATAAAGACAATTTTATTCAAGGCCTAAGATATAAAGATTTAAAAGCTTTAGATTATTTAGTAGAAAACTATTCAGACTTAGGGTTAAAGGTAAGTTATAGCGTCTTAAATAATAGACAACTTAGTGAGGAATGTACTAATGATGTTTTACTTAAAATTTGGAATAATATAGATGCATTTAAGGGGAATAGTGAAAATTTTGCAAAATGGTTTGTAGTAATAGCTAAAAGACACGCAATAGATGTACTGAGAAGAGAAAAAAGACACAGTTGTAACTTAGAGTTAAAGGAAGATTTGGTTTATACCATTGATGATAATACTTTTGAACAAGTAAATAAGAAGTTAGAGGGAGAAGCATTGAAGTCTAGTTTAGAAATGTTAGATAAAAATAGCAAAGAAATTATTGTTAGTCGTTATTTTAAGGATGAAAGTCTAGAGGAAATAAGTTCTAACCTAAAAATAAGTAAAAGTGCTGTAAGTAATAGGCTTTCAAGAGTTAAGAAGAAGCTAATGAATATATTTATAGGGGGGGATTTATAA
PROTEIN sequence
Length: 192
MKVPLEGMEKMINKDNFIQGLRYKDLKALDYLVENYSDLGLKVSYSVLNNRQLSEECTNDVLLKIWNNIDAFKGNSENFAKWFVVIAKRHAIDVLRREKRHSCNLELKEDLVYTIDDNTFEQVNKKLEGEALKSSLEMLDKNSKEIIVSRYFKDESLEEISSNLKISKSAVSNRLSRVKKKLMNIFIGGDL*