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NECEvent2014_5_8_scaffold_541

Alias: 175_008_scaffold_541

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_541_1
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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298..1773
DNA (1476bp) protein (492aa)
UPF0061 protein CLOSPO_03790 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SGE0_CLOSG rbh
UPF0061 protein CLOSPO_03790 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATC
hypothetical protein
NECEvent2014_5_8_scaffold_541_2
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2183..3910
DNA (1728bp) protein (576aa)
Amine oxidase (Flavin-containing) n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T1B5_CLOSG rbh
Amine oxidase (Flavin-containing) {ECO:0000313|EMBL:EDU37620.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes AT
amine oxidase rbh
NECEvent2014_5_8_scaffold_541_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4210..5655
DNA (1446bp) protein (482aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
Glycosyl hydrolase, family 1 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SVT8_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS23184.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
NECEvent2014_5_8_scaffold_541_4
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5747..6298)
DNA (552bp) protein (184aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T6U2_CLOSG rbh
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDU37618.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes
transcriptional regulatory protein rbh
NECEvent2014_5_8_scaffold_541_5
unknown

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6318..6569
DNA (252bp) protein (84aa)

This feature has no annotations

NECEvent2014_5_8_scaffold_541_6
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6535..7122
DNA (588bp) protein (196aa)
HDIG domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TBV1_CLOSG rbh
HDIG domain protein {ECO:0000313|EMBL:EDU37617.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;"
HDIG domain-containing protein rbh
NECEvent2014_5_8_scaffold_541_7
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7295..7909)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SGD9_CLOSG rbh
Uncharacterized protein {ECO:0000313|EMBL:EDU37616.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
hypothetical protein
NECEvent2014_5_8_scaffold_541_8
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7950..9326)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T1B2_CLOSG rbh
Uncharacterized protein {ECO:0000313|EMBL:EDU37615.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
membrane-associated ATP-binding domain-containing protein rbh
NECEvent2014_5_8_scaffold_541_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9328..10035)
DNA (708bp) protein (236aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SVT5_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS23189.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
two component transcriptional regulator, LytTR family
NECEvent2014_5_8_scaffold_541_10
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10280..10855
DNA (576bp) protein (192aa)
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:EDU37613.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EDU37613.1};; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase factor sigma-70 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T6T9_CLOSG rbh
NECEvent2014_5_8_scaffold_541_11
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10855..12189
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TBU8_CLOSG rbh
Uncharacterized protein {ECO:0000313|EMBL:EDU37612.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
hypothetical protein
NECEvent2014_5_8_scaffold_541_12
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12427..13017
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SGD8_CLOSG rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDU37611.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogen
TetR family transcriptional regulator
NECEvent2014_5_8_scaffold_541_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13400..13999
DNA (600bp) protein (200aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T1B0_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS23193.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
NECEvent2014_5_8_scaffold_541_14
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14013..14852
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SVT3_CLOSG rbh
Uncharacterized protein {ECO:0000313|EMBL:EDU37609.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
hypothetical protein
Displaying 14 items

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