Alias: 175_008_scaffold_172
name | lists | location/seqs | annotations | notes |
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NECEvent2014_5_8_scaffold_172_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
3..950
----------------- DNA (948bp) protein (316aa) |
Competence family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3C7_CLOPF
rbh
comC competence related protein
Competence family protein {ECO:0000313|EMBL:ABG87188.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain S
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NECEvent2014_5_8_scaffold_172_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
994..2040
----------------- DNA (1047bp) protein (349aa) |
holA; DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EDT25244.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDT25244.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
DNA polymerase III, delta subunit n=2 Tax=Clostridium perfringens RepID=B1R3C6_CLOPF
rbh
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NECEvent2014_5_8_scaffold_172_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2136..2399)
----------------- DNA (264bp) protein (88aa) |
30S ribosomal protein S20 n=8 Tax=Clostridium perfringens RepID=RS20_CLOP1
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
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NECEvent2014_5_8_scaffold_172_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
2595..3572
----------------- DNA (978bp) protein (326aa) |
gpr; germination protease (EC:3.4.24.78)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-
Germination protease n=3 Tax=Clostridium perfringens RepID=GPR_CLOP1
rbh
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NECEvent2014_5_8_scaffold_172_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
3721..4806
----------------- DNA (1086bp) protein (362aa) |
Stage II sporulation protein P n=3 Tax=Clostridium perfringens RepID=Q0TNS0_CLOP1
rbh
stage II sporulation protein P
Stage II sporulation protein P {ECO:0000313|EMBL:BAB81746.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
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NECEvent2014_5_8_scaffold_172_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
4873..5223
----------------- DNA (351bp) protein (117aa) |
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNS1_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25257.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
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NECEvent2014_5_8_scaffold_172_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5344..7146
----------------- DNA (1803bp) protein (601aa) |
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=6 Tax=Clostridium perfringens RepID=LEPA_CLOP1
rbh
lepA; GTP-binding protein LepA
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NECEvent2014_5_8_scaffold_172_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
7403..7672
----------------- DNA (270bp) protein (90aa) |
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNS3_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16279.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
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NECEvent2014_5_8_scaffold_172_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
7942..9075
----------------- DNA (1134bp) protein (378aa) |
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNS4_CLOP1
rbh
coproporphyrinogen III oxidase
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:EIA16439.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
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NECEvent2014_5_8_scaffold_172_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
9272..10291
----------------- DNA (1020bp) protein (340aa) |
Heat-inducible transcription repressor HrcA n=2 Tax=Clostridium perfringens RepID=HRCA_CLOP1
rbh
hrcA; heat-inducible transcription repressor
Heat-inducible transcription repressor HrcA {ECO:0000255|HAMAP-Rule:MF_00081}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
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NECEvent2014_5_8_scaffold_172_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
10322..10948
----------------- DNA (627bp) protein (209aa) |
Protein GrpE n=5 Tax=Clostridium perfringens RepID=GRPE_CLOP1
rbh
grpE; heat shock protein GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
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NECEvent2014_5_8_scaffold_172_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
11005..12864
----------------- DNA (1860bp) protein (620aa) |
Chaperone protein DnaK n=10 Tax=Clostridium perfringens RepID=DNAK_CLOP1
rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; molecular chaperone DnaK
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NECEvent2014_5_8_scaffold_172_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
12978..14141
----------------- DNA (1164bp) protein (388aa) |
Chaperone protein DnaJ n=9 Tax=Clostridium perfringens RepID=DNAJ_CLOPE
rbh
dnaJ; molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
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NECEvent2014_5_8_scaffold_172_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
14321..15013
----------------- DNA (693bp) protein (231aa) |
ABC transporter, ATP-binding protein n=5 Tax=Clostridium perfringens RepID=B1BII5_CLOPF
rbh
ABC transporter
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT16331.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
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NECEvent2014_5_8_scaffold_172_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
15000..15827
----------------- DNA (828bp) protein (276aa) |
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIT3_CLOPE
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81736.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
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NECEvent2014_5_8_scaffold_172_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
15843..17021
----------------- DNA (1179bp) protein (393aa) |
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPK0_CLOPF
rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16364.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
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NECEvent2014_5_8_scaffold_172_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
17023..17379
----------------- DNA (357bp) protein (119aa) |
GntR family transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CY54_CLOPF
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:EIA16431.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
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NECEvent2014_5_8_scaffold_172_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
17605..18546
----------------- DNA (942bp) protein (314aa) |
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase n=8 Tax=Clostridium perfringens RepID=PRMA_CLOPE
rbh
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NECEvent2014_5_8_scaffold_172_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
18569..19321
----------------- DNA (753bp) protein (251aa) |
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; C
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium perfringens F262 RepID=H7CY52_CLOPF
rbh
16S ribosomal RNA methyltransferase RsmE
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NECEvent2014_5_8_scaffold_172_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
19321..20625
----------------- DNA (1305bp) protein (435aa) |
MiaB-like tRNA modifying enzyme n=2 Tax=Clostridium perfringens RepID=Q0TNT5_CLOP1
rbh
MiaB-like tRNA modifying enzyme
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EDT70368.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D s
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NECEvent2014_5_8_scaffold_172_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
20694..21038
----------------- DNA (345bp) protein (115aa) |
HIT family protein n=5 Tax=Clostridium perfringens RepID=H7CY50_CLOPF
HIT family protein {ECO:0000313|EMBL:EDT70362.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;
HIT family protein
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NECEvent2014_5_8_scaffold_172_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
21158..21334
----------------- DNA (177bp) protein (59aa) |
30S ribosomal protein S21 n=11 Tax=Clostridium perfringens RepID=RS21_CLOP1
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
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NECEvent2014_5_8_scaffold_172_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
21384..21833
----------------- DNA (450bp) protein (150aa) |
GatB/Yqey domain-containing protein n=11 Tax=Clostridium perfringens RepID=H7CY48_CLOPF
GatB/Yqey domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81728.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
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NECEvent2014_5_8_scaffold_172_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
22057..22338
----------------- DNA (282bp) protein (94aa) |
Sporulation protein YqfC n=5 Tax=Clostridium perfringens RepID=H7CY47_CLOPF
yqfC; sporulation protein YqfC
Sporulation protein YqfC {ECO:0000313|EMBL:ABG87867.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM
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NECEvent2014_5_8_scaffold_172_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
22340..23476
----------------- DNA (1137bp) protein (379aa) |
Sporulation protein YqfD n=3 Tax=Clostridium perfringens RepID=H1CT02_CLOPF
rbh
stage IV sporulation protein
Putative stage IV sporulation protein {ECO:0000313|EMBL:EIA16423.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
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NECEvent2014_5_8_scaffold_172_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
23513..25567
----------------- DNA (2055bp) protein (685aa) |
Putative hydrolase n=2 Tax=Clostridium perfringens RepID=H7CY45_CLOPF
rbh
Putative hydrolase {ECO:0000313|EMBL:EIA16422.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hydrolase
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NECEvent2014_5_8_scaffold_172_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25569..26075
----------------- DNA (507bp) protein (169aa) |
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=883064 species="Bacteria; Fi
Endoribonuclease YbeY n=5 Tax=Clostridium perfringens RepID=YBEY_CLOP1
rbh
metalloprotease
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NECEvent2014_5_8_scaffold_172_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
26103..26804
----------------- DNA (702bp) protein (234aa) |
Diacylglycerol kinase/PAP2 family protein n=8 Tax=Clostridium perfringens RepID=H7CY43_CLOPF
rbh
diacylglycerol kinase/PAP2 family protein
Diacylglycerol kinase/PAP2 family protein {ECO:0000313|EMBL:EDT72793.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
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NECEvent2014_5_8_scaffold_172_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
26845..27243
----------------- DNA (399bp) protein (133aa) |
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:EIA16419.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EIA16419.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
Cytidine deaminase n=6 Tax=Clostridium perfringens RepID=H7CY42_CLOPF
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NECEvent2014_5_8_scaffold_172_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
27252..28142
----------------- DNA (891bp) protein (297aa) |
GTPase Era n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=ERA_CLOP1
rbh
era; GTP-binding protein Era
GTPase Era {ECO:0000255|HAMAP-Rule:MF_00367}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 /
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