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NECEvent2014_5_8_scaffold_172

Alias: 175_008_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_172_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..950
DNA (948bp) protein (316aa)
Competence family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3C7_CLOPF rbh
comC competence related protein
Competence family protein {ECO:0000313|EMBL:ABG87188.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain S
NECEvent2014_5_8_scaffold_172_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

994..2040
DNA (1047bp) protein (349aa)
holA; DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EDT25244.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDT25244.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
DNA polymerase III, delta subunit n=2 Tax=Clostridium perfringens RepID=B1R3C6_CLOPF rbh
NECEvent2014_5_8_scaffold_172_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2136..2399)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=8 Tax=Clostridium perfringens RepID=RS20_CLOP1
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_5_8_scaffold_172_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2595..3572
DNA (978bp) protein (326aa)
gpr; germination protease (EC:3.4.24.78)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-
Germination protease n=3 Tax=Clostridium perfringens RepID=GPR_CLOP1 rbh
NECEvent2014_5_8_scaffold_172_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3721..4806
DNA (1086bp) protein (362aa)
Stage II sporulation protein P n=3 Tax=Clostridium perfringens RepID=Q0TNS0_CLOP1 rbh
stage II sporulation protein P
Stage II sporulation protein P {ECO:0000313|EMBL:BAB81746.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
NECEvent2014_5_8_scaffold_172_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4873..5223
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNS1_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25257.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_5_8_scaffold_172_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5344..7146
DNA (1803bp) protein (601aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=6 Tax=Clostridium perfringens RepID=LEPA_CLOP1 rbh
lepA; GTP-binding protein LepA
NECEvent2014_5_8_scaffold_172_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7403..7672
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNS3_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16279.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_5_8_scaffold_172_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7942..9075
DNA (1134bp) protein (378aa)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNS4_CLOP1 rbh
coproporphyrinogen III oxidase
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:EIA16439.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
NECEvent2014_5_8_scaffold_172_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9272..10291
DNA (1020bp) protein (340aa)
Heat-inducible transcription repressor HrcA n=2 Tax=Clostridium perfringens RepID=HRCA_CLOP1 rbh
hrcA; heat-inducible transcription repressor
Heat-inducible transcription repressor HrcA {ECO:0000255|HAMAP-Rule:MF_00081}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_5_8_scaffold_172_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10322..10948
DNA (627bp) protein (209aa)
Protein GrpE n=5 Tax=Clostridium perfringens RepID=GRPE_CLOP1 rbh
grpE; heat shock protein GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
NECEvent2014_5_8_scaffold_172_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11005..12864
DNA (1860bp) protein (620aa)
Chaperone protein DnaK n=10 Tax=Clostridium perfringens RepID=DNAK_CLOP1 rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; molecular chaperone DnaK
NECEvent2014_5_8_scaffold_172_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12978..14141
DNA (1164bp) protein (388aa)
Chaperone protein DnaJ n=9 Tax=Clostridium perfringens RepID=DNAJ_CLOPE rbh
dnaJ; molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
NECEvent2014_5_8_scaffold_172_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14321..15013
DNA (693bp) protein (231aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridium perfringens RepID=B1BII5_CLOPF rbh
ABC transporter
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT16331.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
NECEvent2014_5_8_scaffold_172_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15000..15827
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIT3_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81736.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_8_scaffold_172_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15843..17021
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPK0_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16364.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_5_8_scaffold_172_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17023..17379
DNA (357bp) protein (119aa)
GntR family transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CY54_CLOPF
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:EIA16431.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_5_8_scaffold_172_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17605..18546
DNA (942bp) protein (314aa)
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase n=8 Tax=Clostridium perfringens RepID=PRMA_CLOPE rbh
NECEvent2014_5_8_scaffold_172_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18569..19321
DNA (753bp) protein (251aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; C
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium perfringens F262 RepID=H7CY52_CLOPF rbh
16S ribosomal RNA methyltransferase RsmE
NECEvent2014_5_8_scaffold_172_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19321..20625
DNA (1305bp) protein (435aa)
MiaB-like tRNA modifying enzyme n=2 Tax=Clostridium perfringens RepID=Q0TNT5_CLOP1 rbh
MiaB-like tRNA modifying enzyme
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EDT70368.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D s
NECEvent2014_5_8_scaffold_172_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20694..21038
DNA (345bp) protein (115aa)
HIT family protein n=5 Tax=Clostridium perfringens RepID=H7CY50_CLOPF
HIT family protein {ECO:0000313|EMBL:EDT70362.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;
HIT family protein
NECEvent2014_5_8_scaffold_172_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21158..21334
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=11 Tax=Clostridium perfringens RepID=RS21_CLOP1
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_5_8_scaffold_172_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21384..21833
DNA (450bp) protein (150aa)
GatB/Yqey domain-containing protein n=11 Tax=Clostridium perfringens RepID=H7CY48_CLOPF
GatB/Yqey domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81728.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_8_scaffold_172_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22057..22338
DNA (282bp) protein (94aa)
Sporulation protein YqfC n=5 Tax=Clostridium perfringens RepID=H7CY47_CLOPF
yqfC; sporulation protein YqfC
Sporulation protein YqfC {ECO:0000313|EMBL:ABG87867.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM
NECEvent2014_5_8_scaffold_172_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22340..23476
DNA (1137bp) protein (379aa)
Sporulation protein YqfD n=3 Tax=Clostridium perfringens RepID=H1CT02_CLOPF rbh
stage IV sporulation protein
Putative stage IV sporulation protein {ECO:0000313|EMBL:EIA16423.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_5_8_scaffold_172_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23513..25567
DNA (2055bp) protein (685aa)
Putative hydrolase n=2 Tax=Clostridium perfringens RepID=H7CY45_CLOPF rbh
Putative hydrolase {ECO:0000313|EMBL:EIA16422.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hydrolase
NECEvent2014_5_8_scaffold_172_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25569..26075
DNA (507bp) protein (169aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=883064 species="Bacteria; Fi
Endoribonuclease YbeY n=5 Tax=Clostridium perfringens RepID=YBEY_CLOP1 rbh
metalloprotease
NECEvent2014_5_8_scaffold_172_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26103..26804
DNA (702bp) protein (234aa)
Diacylglycerol kinase/PAP2 family protein n=8 Tax=Clostridium perfringens RepID=H7CY43_CLOPF rbh
diacylglycerol kinase/PAP2 family protein
Diacylglycerol kinase/PAP2 family protein {ECO:0000313|EMBL:EDT72793.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
NECEvent2014_5_8_scaffold_172_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26845..27243
DNA (399bp) protein (133aa)
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:EIA16419.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EIA16419.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
Cytidine deaminase n=6 Tax=Clostridium perfringens RepID=H7CY42_CLOPF
NECEvent2014_5_8_scaffold_172_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27252..28142
DNA (891bp) protein (297aa)
GTPase Era n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=ERA_CLOP1 rbh
era; GTP-binding protein Era
GTPase Era {ECO:0000255|HAMAP-Rule:MF_00367}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 /
Displaying items 1-30 of 39 in total

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