ggKbase home page

NECEvent2014_5_8_scaffold_396

Alias: 175_008_scaffold_396

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_396_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..682
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R706_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23964.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_5_8_scaffold_396_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

658..1317
DNA (660bp) protein (220aa)
ComF protein, homolog n=2 Tax=Clostridium perfringens RepID=Q0TND8_CLOP1 rbh
competence protein FC
ComF protein, homolog {ECO:0000313|EMBL:EDT23929.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3
NECEvent2014_5_8_scaffold_396_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1769..2308
DNA (540bp) protein (180aa)
Ribosomal subunit interface protein n=8 Tax=Clostridium perfringens RepID=H7CYJ6_CLOPF rbh
raiA; ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIA16374.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_5_8_scaffold_396_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2543..5065
DNA (2523bp) protein (841aa)
Protein translocase subunit SecA n=4 Tax=Clostridium perfringens RepID=SECA_CLOP1 rbh
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
NECEvent2014_5_8_scaffold_396_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5318..5440
DNA (123bp) protein (41aa)
Peptide chain release factor 2 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=RF2_CLOPS
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000255|HAMAP-Rule:MF_00094}; Short=RF-2 {ECO:0000255|HAMAP-Rule:MF_00094};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
NECEvent2014_5_8_scaffold_396_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5442..6413
DNA (972bp) protein (324aa)
Peptide chain release factor 2 n=4 Tax=Clostridium perfringens RepID=RF2_CLOP1 rbh
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
NECEvent2014_5_8_scaffold_396_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6661..8004)
DNA (1344bp) protein (448aa)
Peptidase family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNE2_CLOP1 rbh
peptidase
Peptidase family protein {ECO:0000313|EMBL:EDS79815.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS
NECEvent2014_5_8_scaffold_396_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8116..10278
DNA (2163bp) protein (721aa)
RNA-binding protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNE3_CLOP1 rbh
RNA-binding protein {ECO:0000313|EMBL:EDT23977.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 362
RNA-binding protein
NECEvent2014_5_8_scaffold_396_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10625..11221
DNA (597bp) protein (199aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CYJ1_CLOPF rbh
hypothetical protein
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_8_scaffold_396_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11315..11761)
DNA (447bp) protein (149aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EDT23981.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EDT23981.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
Ribosomal-protein-alanine acetyltransferase n=2 Tax=Clostridium perfringens RepID=Q0TNE5_CLOP1 rbh
NECEvent2014_5_8_scaffold_396_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11761..12465)
DNA (705bp) protein (235aa)
Glycoprotease family protein n=2 Tax=Clostridium perfringens RepID=Q0TNE6_CLOP1 rbh
glycoprotease
Glycoprotease family protein {ECO:0000313|EMBL:EDT23976.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
NECEvent2014_5_8_scaffold_396_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12459..12923)
DNA (465bp) protein (155aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q0SR18_CLOPS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT73307.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_5_8_scaffold_396_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13223..13843
DNA (621bp) protein (207aa)
CBS domain-containing protein n=7 Tax=Clostridium perfringens RepID=H7CYI7_CLOPF rbh
hypothetical protein
CBS domain protein {ECO:0000313|EMBL:EDT15588.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;
NECEvent2014_5_8_scaffold_396_trna_1
unknown

Not on your lists

14107..14179
DNA (73bp)
transferRNA
NECEvent2014_5_8_scaffold_396_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14340..16517
DNA (2178bp) protein (726aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRW3_CLOPF rbh
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDS79750.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
cpdC; 2`,3`-cyclic-nucleotide 2`-phosphodiesterase
NECEvent2014_5_8_scaffold_396_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16657..16839
DNA (183bp) protein (61aa)
Small, acid-soluble spore protein 1 n=11 Tax=Clostridium perfringens RepID=SAS0_CLOPE
small acid-soluble protein Ssp1
Small, acid-soluble spore protein 1 {ECO:0000313|EMBL:EIA16363.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_5_8_scaffold_396_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17120..18259
DNA (1140bp) protein (380aa)
Ser/Thr protein phosphatase family protein n=2 Tax=Clostridium perfringens RepID=B1BKD5_CLOPF rbh
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT27802.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
Ser/Thr protein phosphatase
NECEvent2014_5_8_scaffold_396_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18249..19691
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDY1_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT27718.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
Displaying 18 items

View Taxonomy