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NECEvent2014_5_8_scaffold_462

Alias: 175_008_scaffold_462

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_462_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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252..386
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=11 Tax=Clostridium perfringens RepID=RL34_CLOP1
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000255|HAMAP-Rule:MF_00391}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_5_8_scaffold_462_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

447..824
DNA (378bp) protein (126aa)
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component n=11 Tax=Clostridium perfringens RepID=RNPA_CLOP1
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
NECEvent2014_5_8_scaffold_462_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

796..1005
DNA (210bp) protein (70aa)
Putative membrane protein insertion efficiency factor n=11 Tax=Clostridium perfringens RepID=YIDD_CLOP1
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
NECEvent2014_5_8_scaffold_462_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1039..1755
DNA (717bp) protein (239aa)
Membrane protein OxaA n=2 Tax=Clostridium perfringens RepID=Q0TLZ2_CLOP1 rbh
oxaA; inner membrane protein translocase component YidC
Membrane protein OxaA {ECO:0000313|EMBL:EDT22646.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3
NECEvent2014_5_8_scaffold_462_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1797..2420
DNA (624bp) protein (208aa)
R3H domain protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RAU5_CLOPF rbh
R3H domain protein {ECO:0000313|EMBL:EDT22613.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626
jag; SpoIIIJ-associated protein
NECEvent2014_5_8_scaffold_462_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2762..4138
DNA (1377bp) protein (459aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
tRNA modification GTPase MnmE n=9 Tax=Clostridium perfringens RepID=MNME_CLOP1 rbh
trmE; tRNA modification GTPase TrmE
NECEvent2014_5_8_scaffold_462_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4153..6045
DNA (1893bp) protein (631aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=3 Tax=Clostridium perfringens RepID=MNMG_CLOP1 rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129}; TaxID=195103 species="Bacter
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
NECEvent2014_5_8_scaffold_462_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6222..6941
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
Ribosomal RNA small subunit methyltransferase G n=3 Tax=Clostridium perfringens RepID=RSMG_CLOP1 rbh
gidB; 16S rRNA methyltransferase GidB
NECEvent2014_5_8_scaffold_462_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7191..7964
DNA (774bp) protein (258aa)
Sporulation initiation inhibitor protein soj n=10 Tax=Clostridium perfringens RepID=H7D010_CLOPF rbh
soj; sporulation initiation inhibitor protein soj
Sporulation initiation inhibitor protein soj {ECO:0000313|EMBL:EDT13616.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
NECEvent2014_5_8_scaffold_462_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7965..8825
DNA (861bp) protein (287aa)
Stage 0 sporulation protein J n=9 Tax=Clostridium perfringens RepID=H7D009_CLOPF rbh
stage 0 sporulation protein J
Stage 0 sporulation protein J {ECO:0000313|EMBL:EDT22649.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str
NECEvent2014_5_8_scaffold_462_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8874..9371
DNA (498bp) protein (166aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D008_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25916.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_5_8_scaffold_462_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9521..10111)
DNA (591bp) protein (197aa)
Putative sporulation protein YyaC n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TM01_CLOP1 rbh
yyaC; sporulation protein YyaC
Putative sporulation protein YyaC {ECO:0000313|EMBL:EIA15782.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F
NECEvent2014_5_8_scaffold_462_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10161..11225)
DNA (1065bp) protein (355aa)
Sporulation integral membrane protein YtvI n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TM02_CLOP1 rbh
ytvI; sporulation integral membrane protein YtvI
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EDT22635.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
NECEvent2014_5_8_scaffold_462_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11237..12397)
DNA (1161bp) protein (387aa)
Cysteine desulfurase family protein n=1 Tax=Clostridium perfringens F262 RepID=H7D005_CLOPF rbh
Cysteine desulfurase family protein {ECO:0000313|EMBL:EIA15780.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
nifS; cysteine desulfurase
NECEvent2014_5_8_scaffold_462_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12340..13056)
DNA (717bp) protein (239aa)
LysE family translocator protein n=9 Tax=Clostridium perfringens RepID=H7D004_CLOPF rbh
LysE family translocator protein
Translocator protein, LysE family {ECO:0000313|EMBL:EDT13599.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
NECEvent2014_5_8_scaffold_462_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13216..13449
DNA (234bp) protein (78aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D003_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15778.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_8_scaffold_462_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13482..14342
DNA (861bp) protein (287aa)
Mechanosensitive ion channel family protein n=7 Tax=Clostridium perfringens RepID=Q0TM06_CLOP1 rbh
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EDT13617.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_5_8_scaffold_462_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14379..14591
DNA (213bp) protein (71aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D001_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70820.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_5_8_scaffold_462_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14735..15022
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=11 Tax=Clostridium perfringens RepID=RS6_CLOP1
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str.
NECEvent2014_5_8_scaffold_462_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15036..15488
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=10 Tax=Clostridium perfringens RepID=SSB_CLOPE rbh
ssb; single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=289380 species="Bacteria; Firmicutes; Clostrid
NECEvent2014_5_8_scaffold_462_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15519..15761
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=11 Tax=Clostridium perfringens RepID=RS18_CLOP1
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_5_8_scaffold_462_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16044..16361
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0SPR9_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80479.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
NECEvent2014_5_8_scaffold_462_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16379..17374
DNA (996bp) protein (332aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPS0_CLOPS rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABG86092.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain S
Displaying 23 items

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