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NECEvent2014_5_8_scaffold_519

Alias: 175_008_scaffold_519

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_519_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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300..1145
DNA (846bp) protein (282aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
Energy-coupling factor transporter ATP-binding protein EcfA1 n=8 Tax=Clostridium perfringens RepID=ECFA1_CLOP1 rbh
cobalt transporter ATP-binding subunit
NECEvent2014_5_8_scaffold_519_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1130..1987
DNA (858bp) protein (286aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
Energy-coupling factor transporter ATP-binding protein EcfA2 n=9 Tax=Clostridium perfringens RepID=ECFA2_CLOP1 rbh
cbiO; cobalt transporter ATP-binding subunit
NECEvent2014_5_8_scaffold_519_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2003..2809
DNA (807bp) protein (269aa)
Energy-coupling factor transporter transmembrane protein EcfT n=6 Tax=Clostridium perfringens RepID=Q0TMS9_CLOP1 rbh
hypothetical protein
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=451754 species="Bacter
NECEvent2014_5_8_scaffold_519_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2967..3701
DNA (735bp) protein (245aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=3 Tax=Clostridium perfringens RepID=Q0TMT0_CLOP1 rbh
NECEvent2014_5_8_scaffold_519_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3848..4282
DNA (435bp) protein (145aa)
50S ribosomal protein L13 n=7 Tax=Clostridium perfringens RepID=RL13_CLOP1
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_5_8_scaffold_519_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4309..4701
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=9 Tax=Clostridium perfringens RepID=RS9_CLOP1
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_5_8_scaffold_519_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5092..6705
DNA (1614bp) protein (538aa)
Na/Pi-cotransporter family protein/PhoU family protein n=6 Tax=Clostridium perfringens RepID=H7CZ73_CLOPF rbh
Na/Pi-cotransporter family protein/PhoU family protein
Na/Pi-cotransporter family protein/PhoU family protein {ECO:0000313|EMBL:EDT15949.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
NECEvent2014_5_8_scaffold_519_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6896..7567
DNA (672bp) protein (224aa)
cwlD; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase CwlD n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMT4_CLOP1 rbh
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EIA16138.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_5_8_scaffold_519_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7574..7726)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHW0_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82072.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_8_scaffold_519_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7828..8685)
DNA (858bp) protein (286aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CZ71_CLOPF rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT27489.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
NECEvent2014_5_8_scaffold_519_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8939..9637
DNA (699bp) protein (233aa)
DNA-binding response regulator n=10 Tax=Clostridium perfringens RepID=H7CZ70_CLOPF rbh
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EDT15919.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
NECEvent2014_5_8_scaffold_519_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9690..11441
DNA (1752bp) protein (584aa)
Two-component sensor histidine kinase n=6 Tax=Clostridium perfringens RepID=H7CZ69_CLOPF rbh
Two-component sensor histidine kinase {ECO:0000313|EMBL:EIA16135.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
sensor histidine kinase
NECEvent2014_5_8_scaffold_519_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11613..11969
DNA (357bp) protein (119aa)
ArsC family protein n=2 Tax=Clostridium perfringens RepID=Q0TMT8_CLOP1
ArsC family protein
ArsC family protein {ECO:0000313|EMBL:EDT71436.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.
NECEvent2014_5_8_scaffold_519_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12253..14484
DNA (2232bp) protein (744aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
nrdA; ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=3 Tax=Clostridium perfringens RepID=H7CZ67_CLOPF rbh
NECEvent2014_5_8_scaffold_519_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14580..15587
DNA (1008bp) protein (336aa)
nrdF; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
Ribonucleoside-diphosphate reductase subunit beta n=9 Tax=Clostridium perfringens RepID=H7CZ66_CLOPF rbh
Displaying 15 items

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