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NECEvent2014_5_8_scaffold_535

Alias: 175_008_scaffold_535

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_535_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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38..673
DNA (636bp) protein (212aa)
Probable septum site-determining protein MinC n=11 Tax=Clostridium perfringens RepID=MINC_CLOP1 rbh
minC; septum formation inhibitor
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
NECEvent2014_5_8_scaffold_535_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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702..1499
DNA (798bp) protein (266aa)
Site-determining protein n=11 Tax=Clostridium perfringens RepID=H7CYG2_CLOPF rbh
minD; septum site-determining protein MinD
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
NECEvent2014_5_8_scaffold_535_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1510..1782
DNA (273bp) protein (91aa)
Cell division topological specificity factor n=10 Tax=Clostridium perfringens RepID=MINE_CLOP1
minE; cell division topological specificity factor MinE
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
NECEvent2014_5_8_scaffold_535_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1930..3054
DNA (1125bp) protein (375aa)
Cell cycle protein FtsW n=7 Tax=Clostridium perfringens RepID=H7CYG0_CLOPF rbh
cell cycle protein FtsW
Rod shape-determining protein RodA {ECO:0000313|EMBL:EDT15553.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_5_8_scaffold_535_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3206..4096
DNA (891bp) protein (297aa)
M23 peptidase domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RE05_CLOPF rbh
M23 peptidase domain protein {ECO:0000313|EMBL:EDT27809.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE st
M23 peptidase domain-containing protein
NECEvent2014_5_8_scaffold_535_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4045..4899
DNA (855bp) protein (285aa)
Peptidase, M50 family {ECO:0000313|EMBL:EDT27716.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDT27716.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
M50 family peptidase (EC:3.4.24.-)
Peptidase, M50 family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RE06_CLOPF rbh
NECEvent2014_5_8_scaffold_535_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5031..6884
DNA (1854bp) protein (618aa)
Radical SAM domain protein n=3 Tax=Clostridium perfringens RepID=Q0TNH9_CLOP1 rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB81839.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
radical SAM domain-containing protein rbh
NECEvent2014_5_8_scaffold_535_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6868..7569
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RE08_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81838.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_8_scaffold_535_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7586..9028
DNA (1443bp) protein (481aa)
Ribonuclease, Rne/Rng family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RE09_CLOPF rbh
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:EDT27725.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE st
rng; ribonuclease, Rne/Rng family
NECEvent2014_5_8_scaffold_535_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9154..9465
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=10 Tax=Clostridium perfringens RepID=RL21_CLOP1
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_5_8_scaffold_535_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9475..9846
DNA (372bp) protein (124aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q0SR52_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87268.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_5_8_scaffold_535_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9850..10152
DNA (303bp) protein (101aa)
50S ribosomal protein L27 n=10 Tax=Clostridium perfringens RepID=RL27_CLOP1
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str
NECEvent2014_5_8_scaffold_535_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10319..11605
DNA (1287bp) protein (429aa)
GTPase Obg n=7 Tax=Clostridium perfringens RepID=OBG_CLOP1 rbh
obgE; GTPase ObgE
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
NECEvent2014_5_8_scaffold_535_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11623..11925
DNA (303bp) protein (101aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=Q8XIJ3_CLOPE
putative RNA-binding protein
Putative RNA-binding protein {ECO:0000313|EMBL:EDT15284.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str.
NECEvent2014_5_8_scaffold_535_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11927..12535
DNA (609bp) protein (203aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase n=8 Tax=Clostridium perfringens RepID=NADD_CLOP1 rbh
NECEvent2014_5_8_scaffold_535_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12538..13107
DNA (570bp) protein (190aa)
HD domain-containing protein n=2 Tax=Clostridium perfringens RepID=H7CYE8_CLOPF rbh
HD domain protein {ECO:0000313|EMBL:EDT15329.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
HD domain-containing protein
NECEvent2014_5_8_scaffold_535_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13130..14452
DNA (1323bp) protein (441aa)
Cell envelope-related transcriptional attenuator domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNI9_CLOP1 rbh
cell envelope-related function transcriptional attenuator
Cell envelope-related transcriptional attenuator domain protein {ECO:0000313|EMBL:EDT25316.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
NECEvent2014_5_8_scaffold_535_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14440..15195
DNA (756bp) protein (252aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Pseudouridine synthase, RluA family n=2 Tax=Clostridium perfringens RepID=Q0TNJ0_CLOP1 rbh
RluA family pseudouridine synthase
Displaying 18 items

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