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NECEvent2014_5_8_scaffold_547

Alias: 175_008_scaffold_547

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_547_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..928)
DNA (927bp) protein (309aa)
Cell division protein FtsZ n=7 Tax=Clostridium perfringens RepID=H7CXG0_CLOPF rbh
ftsZ; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_5_8_scaffold_547_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(942..2180)
DNA (1239bp) protein (413aa)
Cell division protein FtsA n=1 Tax=Clostridium perfringens F262 RepID=H7CXG1_CLOPF rbh
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;
ftsA; cell division protein FtsA
NECEvent2014_5_8_scaffold_547_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2258..3310)
DNA (1053bp) protein (351aa)
Twitching motility protein PilT n=8 Tax=Clostridium perfringens RepID=H7CXG2_CLOPF rbh
pilT; twitching motility protein PilT
Twitching motility protein PilT {ECO:0000313|EMBL:EDT26462.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE
NECEvent2014_5_8_scaffold_547_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3491..4192)
DNA (702bp) protein (234aa)
RNA polymerase sigma factor n=11 Tax=Clostridium perfringens RepID=H7CXG3_CLOPF rbh
sigK; sporulation sigma factor SigK
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str
NECEvent2014_5_8_scaffold_547_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4255..5922)
DNA (1668bp) protein (556aa)
Putative penicillin-binding protein n=2 Tax=Clostridium perfringens RepID=B1BJ87_CLOPF rbh
Putative penicillin-binding protein {ECO:0000313|EMBL:EDS80280.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
spoVD; stage V sporulation protein D
NECEvent2014_5_8_scaffold_547_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6035..6661)
DNA (627bp) protein (209aa)
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000255|HAMAP-Rule:MF_00551}; EC=2.7.1.48 {ECO:0000255|HAMAP-Rule:MF_00551};; Cytidine monophosphokinase {ECO:0000255|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000255|H
Uridine kinase n=9 Tax=Clostridium perfringens RepID=URK_CLOP1 rbh
NECEvent2014_5_8_scaffold_547_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6661..7890)
DNA (1230bp) protein (410aa)
U32 family peptidase n=8 Tax=Clostridium perfringens RepID=H7CXG6_CLOPF rbh
U32 family peptidase
Peptidase, U32 family {ECO:0000313|EMBL:EDT13517.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS198
NECEvent2014_5_8_scaffold_547_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7896..8540)
DNA (645bp) protein (215aa)
O-methyltransferase family protein n=8 Tax=Clostridium perfringens RepID=H7CXG7_CLOPF rbh
O-methyltransferase
O-methyltransferase family protein {ECO:0000313|EMBL:EDT13504.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_5_8_scaffold_547_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8556..9620)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=B1BJ85_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS80249.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_5_8_scaffold_547_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9727..11559)
DNA (1833bp) protein (611aa)
GTP-binding protein TypA n=5 Tax=Clostridium perfringens RepID=Q0TPI0_CLOP1 rbh
GTP-binding protein TypA {ECO:0000313|EMBL:EDT71581.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS
typA; GTP-binding protein TypA
NECEvent2014_5_8_scaffold_547_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11716..13461)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XJI1_CLOPE rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB81481.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
hypothetical protein
NECEvent2014_5_8_scaffold_547_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13454..13906)
DNA (453bp) protein (151aa)
FUR family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CXH1_CLOPF rbh
FUR family transcriptional regulator
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDT13506.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_5_8_scaffold_547_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13927..14181)
DNA (255bp) protein (85aa)
UPF0473 protein CPR_1747 n=9 Tax=Clostridium perfringens RepID=Y1747_CLOPS
hypothetical protein
UPF0473 protein HA1_10696 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_5_8_scaffold_547_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14197..14610)
DNA (414bp) protein (138aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=451755 specie
Putative Holliday junction resolvase n=10 Tax=Clostridium perfringens RepID=RUVX_CLOP1
Holliday junction resolvase-like protein
NECEvent2014_5_8_scaffold_547_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14658..14957)
DNA (300bp) protein (100aa)
UPF0297 protein CPR_1749 n=10 Tax=Clostridium perfringens RepID=Y1749_CLOPS
hypothetical protein
UPF0297 protein HA1_10706 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
Displaying 15 items

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