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NECEvent2014_5_8_scaffold_550

Alias: 175_008_scaffold_550

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_550_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1754
DNA (1752bp) protein (584aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XH48_CLOPE rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB82343.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
DHH family protein
NECEvent2014_5_8_scaffold_550_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1756..2202
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=11 Tax=Clostridium perfringens RepID=RL9_CLOP1
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000255|HAMAP-Rule:MF_00503}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
NECEvent2014_5_8_scaffold_550_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2218..4116
DNA (1899bp) protein (633aa)
ATP-dependent protease n=9 Tax=Clostridium perfringens RepID=H7CZZ3_CLOPF rbh
ATP-dependent protease {ECO:0000313|EMBL:EIA15768.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ATP-dependent protease
NECEvent2014_5_8_scaffold_550_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4532..5866
DNA (1335bp) protein (445aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase {ECO:0000313|EMBL:EDS80507.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDS80507.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Replicative DNA helicase n=7 Tax=Clostridium perfringens RepID=Q0TM16_CLOP1 rbh
NECEvent2014_5_8_scaffold_550_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6044..6844
DNA (801bp) protein (267aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
Pyrroline-5-carboxylate reductase n=3 Tax=Clostridium perfringens RepID=Q0TM17_CLOP1 rbh
NECEvent2014_5_8_scaffold_550_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7122..7610
DNA (489bp) protein (163aa)
PTS system, IIB component n=5 Tax=Clostridium perfringens RepID=H7CZZ0_CLOPF rbh
PTS system transporter subunit IIB
PTS system, IIB component {ECO:0000313|EMBL:EIA15765.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_8_scaffold_550_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7657..8448
DNA (792bp) protein (264aa)
PTS system, IIC component n=10 Tax=Clostridium perfringens RepID=H7CZY9_CLOPF rbh
PTS system transporter subunit IIC
PTS system, IIC component {ECO:0000313|EMBL:EDT13467.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
NECEvent2014_5_8_scaffold_550_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8448..9254
DNA (807bp) protein (269aa)
PTS system, IID component n=6 Tax=Clostridium perfringens RepID=H7CZY8_CLOPF rbh
PTS system transporter subunit IID
PTS system, IID component {ECO:0000313|EMBL:EIA15763.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_8_scaffold_550_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9427..9831
DNA (405bp) protein (135aa)
PTS system, IIA component n=5 Tax=Clostridium perfringens RepID=Q0TM21_CLOP1
PTS system transporter subunit IIA
Probable PTS system {ECO:0000313|EMBL:BAB82335.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Ty
NECEvent2014_5_8_scaffold_550_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9848..10111
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XH57_CLOPE
preprotein translocase subunit
Uncharacterized protein {ECO:0000313|EMBL:BAB82334.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_8_scaffold_550_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10248..10973
DNA (726bp) protein (242aa)
Transcriptional regulator, GntR family n=3 Tax=Clostridium perfringens RepID=Q0TM23_CLOP1 rbh
GntR family transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB82333.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_5_8_scaffold_550_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11030..11887)
DNA (858bp) protein (286aa)
gatY; tagatose-bisphosphate aldolase (EC:4.1.2.2)
Probable tagatose-bisphosphate aldolase n=2 Tax=Clostridium perfringens RepID=Q8XH59_CLOPE rbh
Probable tagatose-bisphosphate aldolase {ECO:0000313|EMBL:BAB82332.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_5_8_scaffold_550_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11907..13079)
DNA (1173bp) protein (391aa)
Putative sugar isomerase, AgaS family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TM25_CLOP1 rbh
sugar isomerase
Putative sugar isomerase {ECO:0000313|EMBL:EIA15758.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_8_scaffold_550_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13315..14196)
DNA (882bp) protein (294aa)
sdhA; L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EDT22641.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDT22641.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridia
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=7 Tax=Clostridium perfringens RepID=H7CZY2_CLOPF rbh
NECEvent2014_5_8_scaffold_550_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14197..14877)
DNA (681bp) protein (227aa)
sdhB; L-serine dehydratase, iron-sulfur-dependent subunit beta (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EDT13472.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDT13472.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridial
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=9 Tax=Clostridium perfringens RepID=H7CZY1_CLOPF rbh
Displaying 15 items

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