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NECEvent2014_5_8_scaffold_630

Alias: 175_008_scaffold_630

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_630_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19..1449)
DNA (1431bp) protein (477aa)
Orn/Lys/Arg decarboxylase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4N6_CLOPF rbh
Orn/Lys/Arg decarboxylase {ECO:0000313|EMBL:EDT71204.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JG
Orn/Lys/Arg decarboxylase
NECEvent2014_5_8_scaffold_630_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1467..1643)
DNA (177bp) protein (59aa)
Probable sigma-F transcribed protein n=10 Tax=Clostridium perfringens RepID=Q8XHM9_CLOPE
putative csfB protein
Putative csfB protein {ECO:0000313|EMBL:EDT26017.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F496
NECEvent2014_5_8_scaffold_630_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1799..2968
DNA (1170bp) protein (390aa)
Amidohydrolase homolog n=2 Tax=Clostridium perfringens RepID=B1BV53_CLOPF rbh
amidohydrolase
Amidohydrolase homolog {ECO:0000313|EMBL:EDT22943.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_5_8_scaffold_630_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2997..3494)
DNA (498bp) protein (166aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZG1_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14450.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_5_8_scaffold_630_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3769..4713
DNA (945bp) protein (315aa)
Probable transport protein n=9 Tax=Clostridium perfringens RepID=Q8XHM6_CLOPE rbh
cation transporter
Putative cation transporter {ECO:0000313|EMBL:EIA15970.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_8_scaffold_630_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4805..5686
DNA (882bp) protein (294aa)
LD-carboxypeptidase family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R9Y1_CLOPF rbh
LD-carboxypeptidase family protein {ECO:0000313|EMBL:EDT22934.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
LD-carboxypeptidase
NECEvent2014_5_8_scaffold_630_trna_2
unknown

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comp(6060..6131)
DNA (72bp)
transferRNA
NECEvent2014_5_8_scaffold_630_trna_1
unknown

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comp(6139..6211)
DNA (73bp)
transferRNA
NECEvent2014_5_8_scaffold_630_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6272..7231)
DNA (960bp) protein (320aa)
33 kDa chaperonin n=9 Tax=Clostridium perfringens RepID=HSLO_CLOP1 rbh
hslO; Hsp33-like chaperonin
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=883064 species="Bacteria; Firmicutes; Clostri
NECEvent2014_5_8_scaffold_630_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7247..7969)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TP58_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16749.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_8_scaffold_630_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8036..8308)
DNA (273bp) protein (91aa)
Small acid-soluble spore protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TP57_CLOP1
small acid-soluble spore protein
Small acid-soluble spore protein beta {ECO:0000313|EMBL:EIA16750.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_5_8_scaffold_630_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8510..9487
DNA (978bp) protein (326aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
Aspartate-semialdehyde dehydrogenase n=3 Tax=Clostridium perfringens RepID=Q0TP56_CLOP1 rbh
NECEvent2014_5_8_scaffold_630_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9512..10387
DNA (876bp) protein (292aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=195103 species
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=DAPA_CLOP1 rbh
NECEvent2014_5_8_scaffold_630_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10460..11224
DNA (765bp) protein (255aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=4 Tax=Clostridium perfringens RepID=DAPB_CLOP1 rbh
NECEvent2014_5_8_scaffold_630_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11518..12660)
DNA (1143bp) protein (381aa)
Aminotransferase, classes I and II n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TP53_CLOP1 rbh
aminotransferase, classes I and II
Probable asparate aminotransferase {ECO:0000313|EMBL:BAB81613.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_5_8_scaffold_630_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12660..13196)
DNA (537bp) protein (179aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=7 Tax=Clostridium perfringens RepID=H1CSP0_CLOPF rbh
cob(I)alamin adenosyltransferase
Putative cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EDT25189.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
Displaying 16 items

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