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NECEvent2014_5_8_scaffold_666

Alias: 175_008_scaffold_666

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_666_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(106..3360)
DNA (3255bp) protein (1085aa)
Helicase, SNF2/RAD54 family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TPX8_CLOP1 rbh
Snf2/Rad54 family helicase rbh
Helicase, SNF2/RAD54 family {ECO:0000313|EMBL:EDT24708.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
NECEvent2014_5_8_scaffold_666_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3538..4539)
DNA (1002bp) protein (334aa)
Transcriptional regulator, LacI family n=2 Tax=Clostridium perfringens RepID=B1R4V1_CLOPF rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDT24637.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
LacI family transcription regulator
NECEvent2014_5_8_scaffold_666_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4678..5583)
DNA (906bp) protein (302aa)
Ribose ABC transporter, ribose-binding protein n=2 Tax=Clostridium perfringens RepID=B1R4V0_CLOPF rbh
Ribose ABC transporter, ribose-binding protein {ECO:0000313|EMBL:EDT27108.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
rbsB; ABC-type sugar transport system, periplasmic component
NECEvent2014_5_8_scaffold_666_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5605..6540)
DNA (936bp) protein (312aa)
Ribose ABC transporter, permease protein n=7 Tax=Clostridium perfringens RepID=H7CX09_CLOPF rbh
rbsC; ribose ABC transporter permease
Ribose ABC transporter, permease protein {ECO:0000313|EMBL:EIA16910.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
NECEvent2014_5_8_scaffold_666_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6554..8059)
DNA (1506bp) protein (502aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
Ribose import ATP-binding protein RbsA n=6 Tax=Clostridium perfringens RepID=RBSA_CLOP1 rbh
rbsA; ribose ABC transporter ATP-binding protein
NECEvent2014_5_8_scaffold_666_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8147..8542)
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=488537 species="Bacteria; Firm
D-ribose pyranase n=5 Tax=Clostridium perfringens RepID=RBSD_CLOP1
rbsD; D-ribose pyranase
NECEvent2014_5_8_scaffold_666_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8545..9477)
DNA (933bp) protein (311aa)
rbsK; ribokinase (EC:2.7.1.15)
Ribokinase {ECO:0000313|EMBL:EDT24735.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EDT24735.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
Ribokinase n=2 Tax=Clostridium perfringens RepID=Q0TPX3_CLOP1 rbh
NECEvent2014_5_8_scaffold_666_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9618..10085)
DNA (468bp) protein (156aa)
def; polypeptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase 2 n=5 Tax=Clostridium perfringens RepID=DEF2_CLOPE rbh
NECEvent2014_5_8_scaffold_666_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10241..11200)
DNA (960bp) protein (320aa)
glycoside hydrolase family protein (EC:2.7.8.-)
Glycosyl transferase, group 4 family protein {ECO:0000313|EMBL:EDT14147.1}; EC=2.7.8.- {ECO:0000313|EMBL:EDT14147.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
Glycosyl transferase, group 4 family protein n=5 Tax=Clostridium perfringens RepID=H7CX14_CLOPF rbh
NECEvent2014_5_8_scaffold_666_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11346..11912)
DNA (567bp) protein (189aa)
Probable transcriptional regulator n=8 Tax=Clostridium perfringens RepID=Q8XJW8_CLOPE rbh
transcriptional regulatory protein
Putative transcriptional regulatory protein {ECO:0000313|EMBL:EDT14145.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_5_8_scaffold_666_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12128..12538)
DNA (411bp) protein (137aa)
V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=10 Tax=Clostridium perfringens RepID=H7CX16_CLOPF
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
Displaying 11 items

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