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NECEvent2014_5_8_scaffold_761

Alias: 175_008_scaffold_761

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_761_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..955
DNA (954bp) protein (318aa)
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EDT71013.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EDT71013.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
accC; biotin carboxylase (EC:6.4.1.2)
NECEvent2014_5_8_scaffold_761_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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948..1826
DNA (879bp) protein (293aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=6 Tax=Clostridium perfringens RepID=ACCD_CLOP1 rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
NECEvent2014_5_8_scaffold_761_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1819..2634
DNA (816bp) protein (272aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=3 Tax=Clostridium perfringens RepID=ACCA_CLOP1 rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
NECEvent2014_5_8_scaffold_761_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2733..3122)
DNA (390bp) protein (130aa)
PadR family transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CVD7_CLOPF
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDT25508.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_5_8_scaffold_761_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3542..4360)
DNA (819bp) protein (273aa)
AP endonuclease n=1 Tax=Clostridium perfringens F262 RepID=H7CVD9_CLOPF rbh
AP endonuclease {ECO:0000313|EMBL:EIA17257.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
AP endonuclease
NECEvent2014_5_8_scaffold_761_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4577..5287
DNA (711bp) protein (237aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Pseudouridine synthase n=2 Tax=Clostridium perfringens RepID=B1RJS2_CLOPF rbh
rluB; ribosomal small subunit pseudouridine synthase B
NECEvent2014_5_8_scaffold_761_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5293..5844
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJS3_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25780.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_5_8_scaffold_761_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5876..6751
DNA (876bp) protein (292aa)
RpiR family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CVE2_CLOPF rbh
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDS81329.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_5_8_scaffold_761_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6968..8188
DNA (1221bp) protein (407aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BFU6_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT25790.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_5_8_scaffold_761_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8310..8963
DNA (654bp) protein (218aa)
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=9 Tax=Clostridium perfringens RepID=KCY_CLOP1 rbh
NECEvent2014_5_8_scaffold_761_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8965..9813
DNA (849bp) protein (283aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=5 Tax=Clostridium perfringens RepID=ISPH_CLOP1 rbh
NECEvent2014_5_8_scaffold_761_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9923..10717
DNA (795bp) protein (265aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XLF6_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80792.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_8_scaffold_761_13
unknown

Not on your lists

10723..10845
DNA (123bp) protein (41aa)

This feature has no annotations

NECEvent2014_5_8_scaffold_761_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10818..10967)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJS9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT25779.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
Displaying 14 items

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