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NECEvent2014_5_8_scaffold_830

Alias: 175_008_scaffold_830

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_830_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(46..312)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R8X0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23280.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_5_8_scaffold_830_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(477..989)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R8W9_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23271.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_5_8_scaffold_830_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(979..1437)
DNA (459bp) protein (153aa)
Prepilin peptidase-dependent n=3 Tax=Clostridium perfringens RepID=H7CXN6_CLOPF
Prepilin peptidase-dependent {ECO:0000313|EMBL:EIA16691.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;
prepilin peptidase-dependent
NECEvent2014_5_8_scaffold_830_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1430..2449)
DNA (1020bp) protein (340aa)
Putative pilus biogenesis protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RI69_CLOPF rbh
Putative pilus biogenesis protein {ECO:0000313|EMBL:EDT26290.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C
pilC; fimbrial assembly protein
NECEvent2014_5_8_scaffold_830_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2436..3824)
DNA (1389bp) protein (463aa)
Probable type IV pilus assembly protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJB6_CLOPE rbh
tapB; type IV pilus assembly protein
Probable type IV pilus assembly protein {ECO:0000313|EMBL:BAB81550.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_5_8_scaffold_830_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3923..4954)
DNA (1032bp) protein (344aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3U1_CLOPF rbh
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:BAB81551.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_8_scaffold_830_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4971..5789)
DNA (819bp) protein (273aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=4 Tax=Clostridium perfringens RepID=H7CXP0_CLOPF rbh
NECEvent2014_5_8_scaffold_830_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5881..7608
DNA (1728bp) protein (576aa)
Probable fibronectin-binding protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJB4_CLOPE rbh
Probable fibronectin-binding protein {ECO:0000313|EMBL:BAB81553.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
fibronectin-binding protein
NECEvent2014_5_8_scaffold_830_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7719..8846)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XJB3_CLOPE rbh
methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:BAB81554.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_8_scaffold_830_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8866..9402)
DNA (537bp) protein (179aa)
pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=11 Tax=Clostridium perfringens RepID=PYRR_CLOP1 rbh
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_5_8_scaffold_830_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9406..10065)
DNA (660bp) protein (220aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Pseudouridine synthase n=6 Tax=Clostridium perfringens RepID=H7CXP4_CLOPF rbh
hypothetical protein
Displaying 11 items

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