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NECEvent2014_5_8_Klebsiella_pneumoniae_57_9_partial

NECEvent2014_5_8_Klebsiella_pneumoniae_57_9
In projects: NECEvent2014_5_8

Consensus taxonomy: Klebsiella pneumoniae  →  Klebsiella  →  Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Refined by TS ESOM

Displaying items 1401-1450 of 1482 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_3221 175_008_scaffold_3221
Species: Escherichia coli (75%)
4 2534 bp 50.00 16.46 70.44
NECEvent2014_5_8_scaffold_4569 175_008_scaffold_4569
Species: Klebsiella pneumoniae (100%)
1 1669 bp 60.99 7.82 70.10
NECEvent2014_5_8_scaffold_4716 175_008_scaffold_4716
Species: Klebsiella pneumoniae (100%)
1 1611 bp 57.54 11.17 70.02
NECEvent2014_5_8_scaffold_5504 175_008_scaffold_5504
Species: Klebsiella pneumoniae (50%)
2 1307 bp 53.71 7.69 70.01
NECEvent2014_5_8_scaffold_5220 175_008_scaffold_5220
Species: Klebsiella pneumoniae (100%)
2 1408 bp 55.47 8.31 69.89
NECEvent2014_5_8_scaffold_3155 175_008_scaffold_3155
Species: Klebsiella pneumoniae (100%)
3 2593 bp 52.29 6.54 69.88
NECEvent2014_5_8_scaffold_1663 175_008_scaffold_1663
Species: Klebsiella pneumoniae (83.33%)
6 5102 bp 52.43 6.94 69.80
NECEvent2014_5_8_scaffold_5224 175_008_scaffold_5224
Species: Klebsiella pneumoniae (66.67%)
3 1407 bp 56.36 7.68 69.58
NECEvent2014_5_8_scaffold_3423 175_008_scaffold_3423
Species: Klebsiella pneumoniae (60%)
5 2345 bp 49.72 8.57 69.34
NECEvent2014_5_8_scaffold_6002 175_008_scaffold_6002
Genus: Klebsiella (66.67%)
3 1161 bp 55.90 13.95 69.34
NECEvent2014_5_8_scaffold_3563 175_008_scaffold_3563
Genus: Klebsiella (75%)
4 2257 bp 46.03 7.24 68.99
NECEvent2014_5_8_scaffold_3488 175_008_scaffold_3488
Species: Klebsiella pneumoniae (100%)
3 2301 bp 58.06 6.00 68.97
NECEvent2014_5_8_scaffold_2851 175_008_scaffold_2851
Species: Klebsiella pneumoniae (100%)
4 2923 bp 56.07 7.08 68.87
NECEvent2014_5_8_scaffold_6139 175_008_scaffold_6139
Species: Klebsiella pneumoniae (100%)
2 1123 bp 52.36 6.28 68.66
NECEvent2014_5_8_scaffold_4016 175_008_scaffold_4016
Species: Klebsiella pneumoniae (100%)
2 1949 bp 57.05 5.62 68.65
NECEvent2014_5_8_scaffold_4619 175_008_scaffold_4619
Species: Klebsiella pneumoniae (100%)
1 1650 bp 57.94 8.82 68.36
NECEvent2014_5_8_scaffold_5444 175_008_scaffold_5444
Species: Klebsiella pneumoniae (100%)
1 1327 bp 60.81 6.90 68.27
NECEvent2014_5_8_scaffold_4477 175_008_scaffold_4477
Species: Klebsiella pneumoniae (80%)
5 1706 bp 55.51 8.62 68.11
NECEvent2014_5_8_scaffold_4675 175_008_scaffold_4675
Species: Escherichia coli (50%)
2 1632 bp 54.47 10.02 67.83
NECEvent2014_5_8_scaffold_5075 175_008_scaffold_5075
Species: Klebsiella pneumoniae (66.67%)
3 1464 bp 52.73 5.12 67.83
NECEvent2014_5_8_scaffold_4155 175_008_scaffold_4155
Species: Klebsiella quasipneumoniae (50%)
2 1867 bp 53.51 6.03 67.81
NECEvent2014_5_8_scaffold_5976 175_008_scaffold_5976
Species: Klebsiella variicola CAG:634 (50%)
2 1169 bp 53.72 5.90 67.75
NECEvent2014_5_8_scaffold_1171 175_008_scaffold_1171
Species: Klebsiella pneumoniae (60%)
5 7288 bp 55.39 7.47 67.63
NECEvent2014_5_8_scaffold_3600 175_008_scaffold_3600
Species: Klebsiella pneumoniae (100%)
1 2229 bp 52.13 6.53 67.29
NECEvent2014_5_8_scaffold_5735 175_008_scaffold_5735
Species: Klebsiella pneumoniae (100%)
2 1236 bp 66.59 8.98 67.23
NECEvent2014_5_8_scaffold_4036 175_008_scaffold_4036
Species: Klebsiella pneumoniae (66.67%)
3 1940 bp 55.82 7.73 66.80
NECEvent2014_5_8_scaffold_2307 175_008_scaffold_2307
Species: Klebsiella pneumoniae (100%)
3 3689 bp 54.65 20.90 66.77
NECEvent2014_5_8_scaffold_5291 175_008_scaffold_5291
Species: Klebsiella pneumoniae (100%)
3 1376 bp 44.40 5.23 66.72
NECEvent2014_5_8_scaffold_4234 175_008_scaffold_4234
Species: Klebsiella pneumoniae (50%)
4 1823 bp 49.64 6.58 66.54
NECEvent2014_5_8_scaffold_5371 175_008_scaffold_5371
Species: Klebsiella pneumoniae (100%)
2 1353 bp 52.55 5.32 66.30
NECEvent2014_5_8_scaffold_5013 175_008_scaffold_5013
Species: Escherichia coli (50%)
2 1484 bp 55.59 6.17 66.11
NECEvent2014_5_8_scaffold_2546 175_008_scaffold_2546
Species: Klebsiella pneumoniae (75%)
4 3274 bp 54.06 5.68 65.61
NECEvent2014_5_8_scaffold_4153 175_008_scaffold_4153
Species: Klebsiella pneumoniae (100%)
2 1868 bp 48.61 6.26 65.52
NECEvent2014_5_8_scaffold_4039 175_008_scaffold_4039
Species: Klebsiella pneumoniae (66.67%)
3 1937 bp 52.92 7.05 65.51
NECEvent2014_5_8_scaffold_6639 175_008_scaffold_6639
Species: Klebsiella pneumoniae (100%)
3 1013 bp 51.43 6.22 65.45
NECEvent2014_5_8_scaffold_4775 175_008_scaffold_4775
Species: Escherichia coli (50%)
2 1584 bp 56.38 5.78 65.34
NECEvent2014_5_8_scaffold_4237 175_008_scaffold_4237
Species: Escherichia coli (50%)
2 1821 bp 52.55 9.14 65.24
NECEvent2014_5_8_scaffold_3803 175_008_scaffold_3803
Genus: Klebsiella (100%)
3 2089 bp 52.23 7.04 65.05
NECEvent2014_5_8_scaffold_5402 175_008_scaffold_5402
Species: Klebsiella pneumoniae (100%)
2 1342 bp 54.25 6.48 65.05
NECEvent2014_5_8_scaffold_3841 175_008_scaffold_3841
Species: Enterococcus gallinarum (100%)
1 2058 bp 52.82 6.49 64.58
NECEvent2014_5_8_scaffold_3328 175_008_scaffold_3328
Species: Klebsiella pneumoniae (100%)
3 2423 bp 46.64 6.93 64.14
NECEvent2014_5_8_scaffold_3730 175_008_scaffold_3730
Species: Klebsiella pneumoniae (100%)
3 2129 bp 50.82 6.06 63.97
NECEvent2014_5_8_scaffold_6607 175_008_scaffold_6607
Species: Klebsiella pneumoniae (100%)
1 1020 bp 52.94 7.21 63.24
NECEvent2014_5_8_scaffold_3287 175_008_scaffold_3287
Species: Klebsiella pneumoniae (100%)
3 2455 bp 52.71 5.50 62.20
NECEvent2014_5_8_scaffold_4397 175_008_scaffold_4397
Species: Klebsiella pneumoniae (50%)
2 1748 bp 53.32 6.01 62.13
NECEvent2014_5_8_scaffold_1554 175_008_scaffold_1554
Species: Klebsiella variicola (57.14%)
7 5474 bp 43.48 7.75 61.93
NECEvent2014_5_8_scaffold_2615 175_008_scaffold_2615
Species: Klebsiella pneumoniae (100%)
3 3172 bp 46.97 6.67 61.85
NECEvent2014_5_8_scaffold_1972 175_008_scaffold_1972
Species: Klebsiella pneumoniae (100%)
5 4304 bp 55.25 6.94 61.83
NECEvent2014_5_8_scaffold_2875 175_008_scaffold_2875
Species: Klebsiella pneumoniae (100%)
3 2905 bp 48.36 6.51 60.83
NECEvent2014_5_8_scaffold_6499 175_008_scaffold_6499
Species: Klebsiella pneumoniae (100%)
2 1045 bp 56.84 5.74 60.29
Displaying items 1401-1450 of 1482 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.