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NECEvent2014_5_8_Klebsiella_pneumoniae_57_9_partial

NECEvent2014_5_8_Klebsiella_pneumoniae_57_9
In projects: NECEvent2014_5_8

Consensus taxonomy: Klebsiella pneumoniae  →  Klebsiella  →  Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Refined by TS ESOM

Displaying items 1451-1482 of 1482 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_4949 175_008_scaffold_4949
Species: Klebsiella pneumoniae (100%)
1 1510 bp 40.26 11.92 60.20
NECEvent2014_5_8_scaffold_6415 175_008_scaffold_6415
Species: Escherichia coli (50%)
2 1060 bp 53.30 6.65 60.00
NECEvent2014_5_8_scaffold_3256 175_008_scaffold_3256
Species: Klebsiella pneumoniae (75%)
4 2497 bp 54.91 6.43 59.71
NECEvent2014_5_8_scaffold_3785 175_008_scaffold_3785
Species: Klebsiella pneumoniae (50%)
2 2102 bp 63.70 6.99 59.66
NECEvent2014_5_8_scaffold_3231 175_008_scaffold_3231
Species: Klebsiella pneumoniae (50%)
4 2522 bp 57.06 6.72 59.60
NECEvent2014_5_8_scaffold_4810 175_008_scaffold_4810
Species: Enterococcus gallinarum (50%)
2 1568 bp 54.08 6.60 58.93
NECEvent2014_5_8_scaffold_3352 175_008_scaffold_3352
Species: Klebsiella pneumoniae (100%)
3 2407 bp 50.73 7.35 58.45
NECEvent2014_5_8_scaffold_5276 175_008_scaffold_5276
Species: Klebsiella variicola (50%)
2 1385 bp 50.83 5.52 57.62
NECEvent2014_5_8_scaffold_5372 175_008_scaffold_5372
Species: Escherichia coli (50%)
2 2142 bp 50.23 209.17 57.42
NECEvent2014_5_8_scaffold_5620 175_008_scaffold_5620
Species: Klebsiella pneumoniae (100%)
2 1277 bp 48.08 10.10 57.32
NECEvent2014_5_8_scaffold_4618 175_008_scaffold_4618
Species: Klebsiella pneumoniae (100%)
4 1650 bp 49.94 4.64 56.91
NECEvent2014_5_8_scaffold_6255 175_008_scaffold_6255
Species: Escherichia coli (100%)
1 1098 bp 43.81 7.92 56.83
NECEvent2014_5_8_scaffold_5256 175_008_scaffold_5256
Species: Klebsiella pneumoniae (100%)
2 1395 bp 55.20 5.05 55.48
NECEvent2014_5_8_scaffold_1971 175_008_scaffold_1971
Species: Klebsiella pneumoniae (62.5%)
8 4309 bp 53.03 7.45 54.56
NECEvent2014_5_8_scaffold_2330 175_008_scaffold_2330
Order: Enterobacteriales (60%)
5 3653 bp 55.82 20.61 52.72
NECEvent2014_5_8_scaffold_2009 175_008_scaffold_2009
Species: Klebsiella pneumoniae (50%)
4 4239 bp 51.62 6.26 52.37
NECEvent2014_5_8_scaffold_5923 175_008_scaffold_5923
Species: Klebsiella pneumoniae (100%)
2 1183 bp 52.41 7.35 51.73
NECEvent2014_5_8_scaffold_3687 175_008_scaffold_3687
Species: Klebsiella quasipneumoniae (50%)
2 2157 bp 51.00 12.87 51.32
NECEvent2014_5_8_scaffold_5691 175_008_scaffold_5691
Species: Klebsiella pneumoniae (66.67%)
3 1252 bp 51.92 7.55 51.04
NECEvent2014_5_8_scaffold_6385 175_008_scaffold_6385
Species: Klebsiella pneumoniae (100%)
3 1064 bp 48.78 6.91 50.75
NECEvent2014_5_8_scaffold_3891 175_008_scaffold_3891
Species: Klebsiella pneumoniae (100%)
3 2035 bp 49.34 7.89 50.71
NECEvent2014_5_8_scaffold_3940 175_008_scaffold_3940
Species: Klebsiella pneumoniae (100%)
1 1999 bp 47.62 5.55 50.28
NECEvent2014_5_8_scaffold_6018 175_008_scaffold_6018
Species: Klebsiella pneumoniae (100%)
3 1156 bp 47.15 27.38 50.09
NECEvent2014_5_8_scaffold_2696 175_008_scaffold_2696
Species: Klebsiella pneumoniae (80%)
5 3097 bp 46.40 5.72 49.98
NECEvent2014_5_8_scaffold_3761 175_008_scaffold_3761
Genus: Klebsiella (50%)
4 2115 bp 31.39 5.11 48.09
NECEvent2014_5_8_scaffold_3262 175_008_scaffold_3262
Species: Klebsiella pneumoniae (100%)
1 2486 bp 37.37 9.59 38.50
NECEvent2014_5_8_scaffold_4359 175_008_scaffold_4359
Genus: Klebsiella (66.67%)
3 1765 bp 45.72 6.20 37.73
NECEvent2014_5_8_scaffold_3461 175_008_scaffold_3461
Genus: Klebsiella (66.67%)
3 2318 bp 48.23 104.31 33.26
NECEvent2014_5_8_scaffold_6532 175_008_scaffold_6532
Species: Klebsiella pneumoniae (100%)
1 1036 bp 50.00 8.40 30.70
NECEvent2014_5_8_scaffold_4025 175_008_scaffold_4025
Species: Klebsiella variicola (100%)
2 1945 bp 42.26 6.48 24.99
NECEvent2014_5_8_scaffold_5058 175_008_scaffold_5058
Species: Klebsiella pneumoniae (100%)
1 1471 bp 37.19 7.55 17.54
NECEvent2014_5_8_scaffold_6059 175_008_scaffold_6059
Species: Klebsiella pneumoniae (100%)
1 1144 bp 47.99 6.95 14.69
Displaying items 1451-1482 of 1482 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.