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NECEvent2014_6_3_scaffold_13

Alias: 176_003_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_3_scaffold_13_1
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..155
DNA (153bp) protein (51aa)
Beta-N-acetylglucosaminidase {ECO:0000313|EMBL:BAC99989.1}; EC=3.2.1.52 {ECO:0000313|EMBL:BAC99989.1};; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
NECEvent2014_6_3_scaffold_13_2
Listeria floridensis, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

210..665
DNA (456bp) protein (152aa)
Thioredoxin {ECO:0000313|EMBL:EUJ32953.1}; TaxID=1265817 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria floridensis FSL S10-1187.;"
NECEvent2014_6_3_scaffold_13_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

748..3186
DNA (2439bp) protein (813aa)
Putative ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CDG02020.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauv
ATP-dependent DNA helicase
NECEvent2014_6_3_scaffold_13_4
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3289..3876
DNA (588bp) protein (196aa)
fructose-2,6-bisphosphatase (EC:5.4.2.1)
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:ERK29943.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;
NECEvent2014_6_3_scaffold_13_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3945..4721
DNA (777bp) protein (259aa)
SAM-dependent methyltransferase {ECO:0000313|EMBL:EEP56402.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 st
SAM-dependent methyltransferase
NECEvent2014_6_3_scaffold_13_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4954..5733
DNA (780bp) protein (260aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH96539.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
zinc/iron permease
NECEvent2014_6_3_scaffold_13_7
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5750..6514
DNA (765bp) protein (255aa)
phosphoglycerate mutase (EC:5.4.2.4)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO
NECEvent2014_6_3_scaffold_13_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6538..6834
DNA (297bp) protein (99aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17611.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_3_scaffold_13_9
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7786..9498
DNA (1713bp) protein (571aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI93981.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.
ABC transporter
NECEvent2014_6_3_scaffold_13_10
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9513..11324
DNA (1812bp) protein (604aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI93982.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.
ABC transporter family protein
NECEvent2014_6_3_scaffold_13_11
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11468..12058
DNA (591bp) protein (197aa)
glutamine amidotransferase of anthranilate synthase
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:ABR36230.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_6_3_scaffold_13_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12045..13391
DNA (1347bp) protein (449aa)
trpE1; anthranilate synthase component 1 (EC:4.1.3.27)
Anthranilate synthase component 1 {ECO:0000313|EMBL:AGX42137.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AGX42137.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
NECEvent2014_6_3_scaffold_13_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13391..14137
DNA (747bp) protein (249aa)
Aminotransferase, class IV {ECO:0000313|EMBL:AJH01162.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostrid
aminotransferase, class IV
NECEvent2014_6_3_scaffold_13_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14127..14684
DNA (558bp) protein (186aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
folE; GTP cyclohydrolase I (EC:3.5.4.16)
NECEvent2014_6_3_scaffold_13_15
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14699..15172
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ03366.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_6_3_scaffold_13_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15191..16000
DNA (810bp) protein (270aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
folP; dihydropteroate synthase (EC:2.5.1.15)
NECEvent2014_6_3_scaffold_13_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16011..16835
DNA (825bp) protein (275aa)
folB; dihydroneopterin aldolase (EC:4.1.2.25)
Uncharacterized protein {ECO:0000313|EMBL:KJZ89161.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_6_3_scaffold_13_18
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16879..19710)
DNA (2832bp) protein (944aa)
levR3; transcriptional regulatory protein LevR (EC:2.7.1.-)
PTS system transcriptional activator {ECO:0000313|EMBL:EHI99227.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VII
NECEvent2014_6_3_scaffold_13_19
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19717..20844)
DNA (1128bp) protein (376aa)
Anaerobic sulfatase-maturating enzyme {ECO:0000313|EMBL:CDI40804.1}; EC=1.8.98.- {ECO:0000313|EMBL:CDI40804.1};; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermo
radical SAM protein
NECEvent2014_6_3_scaffold_13_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20861..21715)
DNA (855bp) protein (285aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16771.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_3_scaffold_13_21
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

21915..22346
DNA (432bp) protein (144aa)
PTS system fructose subfamily transporter subunit IIA
PTS system fructose subfamily IIA component {ECO:0000313|EMBL:ACZ08950.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis
NECEvent2014_6_3_scaffold_13_22
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

22369..22839
DNA (471bp) protein (157aa)
PTS system sorbose subfamily transporter subunit IIB
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:ACZ08951.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (
NECEvent2014_6_3_scaffold_13_23
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

22874..23677
DNA (804bp) protein (268aa)
PTS sorbose-specific transporter subunit IIC
Phosphotransferase system PTS sorbose-specific IIC subunit {ECO:0000313|EMBL:ACZ08952.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebalde
NECEvent2014_6_3_scaffold_13_24
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23677..24489
DNA (813bp) protein (271aa)
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EOH74408.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source
PTS system mannose/fructose/sorbose family transporter subunit IID
NECEvent2014_6_3_scaffold_13_25
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24621..26099
DNA (1479bp) protein (493aa)
Uncharacterized protein {ECO:0000313|EMBL:EOH74407.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malodoratus ATCC 431
sulfatase
NECEvent2014_6_3_scaffold_13_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26115..26543
DNA (429bp) protein (143aa)
lacA; isomerase/acetyltransferase (EC:5.3.1.26)
Galactose-6-phosphate isomerase {ECO:0000313|EMBL:KJU72899.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_3_scaffold_13_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26556..27071
DNA (516bp) protein (172aa)
lacB; galactose-6-phosphate isomerase subunit lacB (EC:5.3.1.26)
Galactose-6-phosphate isomerase subunit lacB {ECO:0000313|EMBL:AIY84639.1}; EC=5.3.1.26 {ECO:0000313|EMBL:AIY84639.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
NECEvent2014_6_3_scaffold_13_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27089..27943
DNA (855bp) protein (285aa)
gatY; tagatose-bisphosphate aldolase (EC:4.1.2.-)
Class II aldolase, tagatose bisphosphate family {ECO:0000313|EMBL:AIY79875.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
NECEvent2014_6_3_scaffold_13_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27962..28891
DNA (930bp) protein (310aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
pfkB; 1-phosphofructokinase (EC:2.7.1.56)
NECEvent2014_6_3_scaffold_13_30
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29071..32736
DNA (3666bp) protein (1222aa)
Uncharacterized protein {ECO:0000313|EMBL:EGG82372.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
alpha-L-arabinofuranosidase
Displaying items 1-30 of 126 in total

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