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NECEvent2014_6_3_scaffold_26

Alias: 176_003_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_3_scaffold_26_1
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1201
DNA (1200bp) protein (400aa)
Chitinase B {ECO:0000313|EMBL:BAA23796.1}; EC=3.2.1.14 {ECO:0000313|EMBL:BAA23796.1};; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
carbohydrate binding domain protein
NECEvent2014_6_3_scaffold_26_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1384..2655
DNA (1272bp) protein (424aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH99002.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
dicarboxylate symporter family protein
NECEvent2014_6_3_scaffold_26_3
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2779..3510
DNA (732bp) protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:ERK28435.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
ABC transporter family protein
NECEvent2014_6_3_scaffold_26_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3503..4693
DNA (1191bp) protein (397aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH99368.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC-2 type transporter family protein
NECEvent2014_6_3_scaffold_26_5
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5036..6286
DNA (1251bp) protein (417aa)
Tat pathway signal sequence {ECO:0000313|EMBL:CDE40824.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prev
Tat (twin-arginine translocation) pathway signal sequence
NECEvent2014_6_3_scaffold_26_6
unknown

Not on your lists

comp(6639..6773)
DNA (135bp) protein (45aa)

This feature has no annotations

NECEvent2014_6_3_scaffold_26_7
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6887..7369)
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:CDB14868.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_6_3_scaffold_26_8
Campylobacter showae, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7422..7832)
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:EKU11915.1}; TaxID=1244083 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campyloba
hypothetical protein
NECEvent2014_6_3_scaffold_26_9
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7959..9401
DNA (1443bp) protein (481aa)
Uncharacterized protein {ECO:0000313|EMBL:CDB14963.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
deoxyguanosinetriphosphate triphosphohydrolase-like protein
NECEvent2014_6_3_scaffold_26_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9549..11321
DNA (1773bp) protein (591aa)
Oligoendopeptidase, pepF/M3 family protein {ECO:0000313|EMBL:AIY81706.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bot
oligoendopeptidase F
NECEvent2014_6_3_scaffold_26_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11466..12773
DNA (1308bp) protein (436aa)
folC; folylpolyglutamate synthase FolC (EC:6.3.2.17)
Protein FolC {ECO:0000313|EMBL:EKY24632.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NECEvent2014_6_3_scaffold_26_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12777..14684
DNA (1908bp) protein (636aa)
HIRAN domain-containing protein {ECO:0000313|EMBL:EHJ00208.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
NECEvent2014_6_3_scaffold_26_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14736..14984)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH97588.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_3_scaffold_26_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15139..16020
DNA (882bp) protein (294aa)
Putative=40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:CDG01975.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
hypothetical protein
NECEvent2014_6_3_scaffold_26_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16013..16546)
DNA (534bp) protein (178aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71260.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_3_scaffold_26_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16629..17405
DNA (777bp) protein (259aa)
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AGX43728.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum D
NECEvent2014_6_3_scaffold_26_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17462..18169
DNA (708bp) protein (236aa)
Single-stranded DNA binding protein {ECO:0000313|EMBL:CDH91404.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (
single-strand binding family protein
NECEvent2014_6_3_scaffold_26_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18288..18998)
DNA (711bp) protein (237aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC:2.3.1.89)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00
NECEvent2014_6_3_scaffold_26_19
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19115..19630
DNA (516bp) protein (172aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ENZ01908.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
ATP:corrinoid adenosyltransferase
NECEvent2014_6_3_scaffold_26_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20043..20798)
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
dapB; 4-hydroxy-tetrahydrodipicolinate reductase DapB
NECEvent2014_6_3_scaffold_26_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20810..21688)
DNA (879bp) protein (293aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
NECEvent2014_6_3_scaffold_26_22
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21705..22694)
DNA (990bp) protein (330aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
NECEvent2014_6_3_scaffold_26_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22872..23123
DNA (252bp) protein (84aa)
small acid-soluble spore protein alpha/beta family protein
Small, acid-soluble spore protein, alpha/beta family {ECO:0000313|EMBL:ABG87200.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
NECEvent2014_6_3_scaffold_26_24
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23190..23939
DNA (750bp) protein (250aa)
putative methyltransferase (EC:2.1.1.-)
Putative methyltransferase {ECO:0000313|EMBL:AGX43718.1}; EC=2.1.1.- {ECO:0000313|EMBL:AGX43718.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
NECEvent2014_6_3_scaffold_26_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23941..24828
DNA (888bp) protein (296aa)
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=536233 species="Bacteria; Firmicutes; Clostri
hslO; Hsp33-like chaperonin
NECEvent2014_6_3_scaffold_26_trna_1
unknown

Not on your lists

comp(24965..25036)
DNA (72bp)
transferRNA
NECEvent2014_6_3_scaffold_26_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25152..25769
DNA (618bp) protein (206aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83965.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_3_scaffold_26_27
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26067..26768)
DNA (702bp) protein (234aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56378.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_6_3_scaffold_26_28
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26911..27801
DNA (891bp) protein (297aa)
Putative sporulation protein YtxC {ECO:0000313|EMBL:CDG01957.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4
ytxC; putative sporulation protein YtxC
NECEvent2014_6_3_scaffold_26_29
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27891..28517
DNA (627bp) protein (209aa)
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
infC; translation initiation factor IF-3
Displaying items 1-30 of 108 in total

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