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NECEvent2014_6_3_scaffold_69

Alias: 176_003_scaffold_69

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_3_scaffold_69_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(196..468)
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:CDG02018.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
metal-sensitive transcriptional repressor family protein
NECEvent2014_6_3_scaffold_69_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(551..1930)
DNA (1380bp) protein (460aa)
radical SAM domain-containing protein rbh
Radical SAM domain-containing protein {ECO:0000313|EMBL:AGX41568.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharo
NECEvent2014_6_3_scaffold_69_3
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2131..3324)
DNA (1194bp) protein (398aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.83)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-amin
NECEvent2014_6_3_scaffold_69_4
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3311..4924)
DNA (1614bp) protein (538aa)
CTP synthase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
NECEvent2014_6_3_scaffold_69_5
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4917..5756)
DNA (840bp) protein (280aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
diaminopimelate epimerase (EC:5.1.1.7)
NECEvent2014_6_3_scaffold_69_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5762..6331)
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI94231.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlet
ANTAR domain-containing protein
NECEvent2014_6_3_scaffold_69_7
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6360..7682)
DNA (1323bp) protein (441aa)
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase type I {ECO:0000313|EMBL:GAE87020.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminis
NECEvent2014_6_3_scaffold_69_8
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7922..8929
DNA (1008bp) protein (336aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0
asnA2; aspartate--ammonia ligase AsnA (EC:6.3.1.1)
NECEvent2014_6_3_scaffold_69_9
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8943..11039
DNA (2097bp) protein (699aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EEG31517.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EEG31517.1};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Rum
glutamine synthetase
NECEvent2014_6_3_scaffold_69_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11080..11988)
DNA (909bp) protein (303aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
rnz; ribonuclease Z (EC:3.1.26.11)
NECEvent2014_6_3_scaffold_69_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12040..12852)
DNA (813bp) protein (271aa)
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EES50959.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'Bo
NECEvent2014_6_3_scaffold_69_12
Vibrio anguillarum, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13047..13256)
DNA (210bp) protein (70aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH34198.1}; TaxID=882102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio anguillarum (strain ATCC
NECEvent2014_6_3_scaffold_69_trna_1
unknown

Not on your lists

13534..13606
DNA (73bp)
transferRNA
NECEvent2014_6_3_scaffold_69_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13881..14909
DNA (1029bp) protein (343aa)
glycosyl hydrolases 18 family protein
Chitinase {ECO:0000313|EMBL:KJU72611.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_3_scaffold_69_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15140..16021)
DNA (882bp) protein (294aa)
transporter rbh
Membrane protein {ECO:0000313|EMBL:KIL07830.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_3_scaffold_69_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16145..18259)
DNA (2115bp) protein (705aa)
Cellulose synthase {ECO:0000313|EMBL:KIL07298.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
cell wall anchored protein
NECEvent2014_6_3_scaffold_69_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18277..19530)
DNA (1254bp) protein (418aa)
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:AIY80655.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinu
N-acetylglucosaminyltransferase
NECEvent2014_6_3_scaffold_69_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19545..20834)
DNA (1290bp) protein (430aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82350.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_3_scaffold_69_18
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20827..21675)
DNA (849bp) protein (283aa)
Putative signaling protein {ECO:0000313|EMBL:EOR26276.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;
putative signaling protein
NECEvent2014_6_3_scaffold_69_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21678..23144)
DNA (1467bp) protein (489aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43082.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_3_scaffold_69_20
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23184..24365)
DNA (1182bp) protein (394aa)
Uncharacterised protein {ECO:0000313|EMBL:CEN69165.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
NECEvent2014_6_3_scaffold_69_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24442..25404)
DNA (963bp) protein (321aa)
membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:AIY79345.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
NECEvent2014_6_3_scaffold_69_22
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25417..25683)
DNA (267bp) protein (89aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB16669.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
NECEvent2014_6_3_scaffold_69_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25687..25917)
DNA (231bp) protein (77aa)
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EES47835.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoN
NECEvent2014_6_3_scaffold_69_24
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26090..26368
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ43360.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
NECEvent2014_6_3_scaffold_69_25
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26429..27016
DNA (588bp) protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:EQB88130.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
putative secreted protein
NECEvent2014_6_3_scaffold_69_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27059..27289)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:EKY23552.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_6_3_scaffold_69_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27378..27800)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH97175.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_3_scaffold_69_28
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27881..28288)
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ02656.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_6_3_scaffold_69_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28348..28644)
DNA (297bp) protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:EEP54081.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
Displaying items 1-30 of 53 in total

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