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NECEvent2014_6_3_scaffold_113

Alias: 176_003_scaffold_113

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_3_scaffold_113_1
unknown

Not on your lists

2..115
DNA (114bp) protein (38aa)

This feature has no annotations

NECEvent2014_6_3_scaffold_113_2
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

120..269
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:EFF63528.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sangu
hypothetical protein
NECEvent2014_6_3_scaffold_113_3
unknown

Not on your lists

comp(288..941)
DNA (654bp) protein (218aa)

This feature has no annotations

NECEvent2014_6_3_scaffold_113_4
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1071..1583
DNA (513bp) protein (171aa)
hypothetical protein
Uncharacterized protein, possibly involved in aromatic compounds catabolism {ECO:0000313|EMBL:AEV68361.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Rumin
NECEvent2014_6_3_scaffold_113_5
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1701..2378)
DNA (678bp) protein (226aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM69016.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_3_scaffold_113_6
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2511..3353
DNA (843bp) protein (281aa)
DegV family EDD domain-containing protein {ECO:0000313|EMBL:ENZ01572.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colic
EDD, DegV family domain protein rbh
NECEvent2014_6_3_scaffold_113_7
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3536..4249
DNA (714bp) protein (238aa)
ABC transporter {ECO:0000313|EMBL:CDB74202.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG
ABC transporter
NECEvent2014_6_3_scaffold_113_8
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4242..5837
DNA (1596bp) protein (532aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ88147.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
ABC transporter permease
NECEvent2014_6_3_scaffold_113_9
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5942..7300
DNA (1359bp) protein (453aa)
ABC transporter permease
Predicted ABC transporter, permease component {ECO:0000313|EMBL:AAK78148.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium a
NECEvent2014_6_3_scaffold_113_10
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7303..8082
DNA (780bp) protein (260aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI91773.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.
bceA; ABC transporter ATP-binding protein
NECEvent2014_6_3_scaffold_113_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8466..9986
DNA (1521bp) protein (507aa)
FAD binding domain protein {ECO:0000313|EMBL:EQG76307.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium di
oxidoreductase
NECEvent2014_6_3_scaffold_113_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10044..10427
DNA (384bp) protein (128aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU70684.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_3_scaffold_113_13
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10438..11061
DNA (624bp) protein (208aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptoco
cyclophilin type peptidyl-prolyl cis-trans isomerase
NECEvent2014_6_3_scaffold_113_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11121..11258
DNA (138bp) protein (46aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES48151.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
NECEvent2014_6_3_scaffold_113_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11313..11936)
DNA (624bp) protein (208aa)
Putative sporulation protein YtaF {ECO:0000313|EMBL:AIY79743.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 20
sporulation protein YtaF
NECEvent2014_6_3_scaffold_113_16
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12012..12974)
DNA (963bp) protein (321aa)
putative protein-tyrosine phosphatase
Uncharacterized protein {ECO:0000313|EMBL:AGK97742.1}; Flags: Precursor;; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium paste
NECEvent2014_6_3_scaffold_113_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13040..13846
DNA (807bp) protein (269aa)
phosphatase YidA (EC:3.1.3.-)
Cof-like hydrolase {ECO:0000313|EMBL:EKY22483.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NECEvent2014_6_3_scaffold_113_18
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13866..14519
DNA (654bp) protein (218aa)
nitrite and sulfite reductase 4Fe-4S subunit
Nitrite reductase {ECO:0000313|EMBL:ETD68257.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
NECEvent2014_6_3_scaffold_113_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14534..15088
DNA (555bp) protein (185aa)
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EKY25793.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785
N-acetyltransferase GCN5
NECEvent2014_6_3_scaffold_113_20
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15103..16239
DNA (1137bp) protein (379aa)
Uncharacterized protein {ECO:0000313|EMBL:EOR27627.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_6_3_scaffold_113_21
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16455..17177
DNA (723bp) protein (241aa)
Uncharacterized protein {ECO:0000313|EMBL:CDB76008.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_6_3_scaffold_113_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17174..18016)
DNA (843bp) protein (281aa)
patatin-like phospholipase family protein
Patatin-like phospholipase family protein {ECO:0000313|EMBL:AIY83080.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bara
NECEvent2014_6_3_scaffold_113_23
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18129..18767)
DNA (639bp) protein (213aa)
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AHV96474.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
NECEvent2014_6_3_scaffold_113_24
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18953..20680)
DNA (1728bp) protein (576aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4
adenine deaminase
NECEvent2014_6_3_scaffold_113_25
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20856..21878)
DNA (1023bp) protein (341aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
Uncharacterized protein {ECO:0000313|EMBL:ERI91786.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
NECEvent2014_6_3_scaffold_113_26
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22010..22933
DNA (924bp) protein (308aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsucc
metA; homoserine O-succinyltransferase MetA (EC:2.3.1.46)
NECEvent2014_6_3_scaffold_113_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22946..23947
DNA (1002bp) protein (334aa)
ptp; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26541.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_6_3_scaffold_113_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24059..25411
DNA (1353bp) protein (451aa)
sodium transporter family protein
Transporter {ECO:0000256|RuleBase:RU003732, ECO:0000313|EMBL:KIL07728.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botuli
NECEvent2014_6_3_scaffold_113_29
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25470..26195
DNA (726bp) protein (242aa)
Two-component system response regulator {ECO:0000313|EMBL:ENZ02354.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colican
two component transcriptional regulator, winged helix family
NECEvent2014_6_3_scaffold_113_30
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26202..27623
DNA (1422bp) protein (474aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
phoR_8; alkaline phosphatase synthesis sensor protein PhoR (EC:2.7.13.3)
Displaying items 1-30 of 45 in total

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