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NECEvent2014_6_3_scaffold_173

Alias: 176_003_scaffold_173

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_3_scaffold_173_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2..1249
DNA (1248bp) protein (416aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EFW05836.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus
NECEvent2014_6_3_scaffold_173_2
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1307..1750
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KGK86425.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
NECEvent2014_6_3_scaffold_173_3
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1887..2387
DNA (501bp) protein (167aa)
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:CDE10066.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Cl
flavodoxin/nitric oxide synthase
NECEvent2014_6_3_scaffold_173_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2440..4485)
DNA (2046bp) protein (682aa)
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EHM89977.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacil
hypothetical protein
NECEvent2014_6_3_scaffold_173_5
unknown

Not on your lists

4873..5418
DNA (546bp) protein (182aa)

This feature has no annotations

NECEvent2014_6_3_scaffold_173_6
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5584..5784
DNA (201bp) protein (67aa)
Uncharacterised protein {ECO:0000313|EMBL:CEP89771.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
NECEvent2014_6_3_scaffold_173_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5862..6701)
DNA (840bp) protein (280aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ91092.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
lactose operon transcriptional activator
NECEvent2014_6_3_scaffold_173_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6884..9907
DNA (3024bp) protein (1008aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ91053.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
bgaL; beta-galactosidase
NECEvent2014_6_3_scaffold_173_9
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9922..11019
DNA (1098bp) protein (366aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03119.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040
NECEvent2014_6_3_scaffold_173_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11038..11358
DNA (321bp) protein (107aa)
PTS system lactose/cellobiose-specific transporter subunit IIB
Phosphotransferase system lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:ADL04110.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospirace
NECEvent2014_6_3_scaffold_173_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11378..12706
DNA (1329bp) protein (443aa)
PTS system cellobiose-specific transporter subunit IIC (EC:2.7.1.69)
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
NECEvent2014_6_3_scaffold_173_12
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12722..13219
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:EHE97555.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
NECEvent2014_6_3_scaffold_173_13
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13358..13576)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:ERK29756.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein DUF2922
NECEvent2014_6_3_scaffold_173_14
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13620..13850)
DNA (231bp) protein (77aa)
hypothetical protein DUF1659
Uncharacterized protein {ECO:0000313|EMBL:AGF57430.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_6_3_scaffold_173_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14004..14405
DNA (402bp) protein (134aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84710.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_3_scaffold_173_16
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14924..15085
DNA (162bp) protein (54aa)
Uncharacterized protein {ECO:0000313|EMBL:EET84722.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
NECEvent2014_6_3_scaffold_173_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15133..15558)
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:EES49924.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
hypothetical protein
NECEvent2014_6_3_scaffold_173_18
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16256..16933
DNA (678bp) protein (226aa)
Uncharacterized protein {ECO:0000313|EMBL:EET85595.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
hypothetical protein
NECEvent2014_6_3_scaffold_173_19
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17006..18397
DNA (1392bp) protein (464aa)
Sensor histidine kinase-like protein {ECO:0000313|EMBL:EET85596.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidiv
sensor histidine kinase-like protein
NECEvent2014_6_3_scaffold_173_20
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18394..19131
DNA (738bp) protein (246aa)
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:EET85597.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
two component transcriptional regulator, LytTR family
NECEvent2014_6_3_scaffold_173_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19424..19756
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH98706.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_3_scaffold_173_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19824..20309
DNA (486bp) protein (162aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD16152.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_6_3_scaffold_173_23
unknown

Not on your lists

comp(20440..20703)
DNA (264bp) protein (88aa)

This feature has no annotations

NECEvent2014_6_3_scaffold_173_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20765..21103
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH96998.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_3_scaffold_173_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21188..21376)
DNA (189bp) protein (63aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD23450.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
NECEvent2014_6_3_scaffold_173_26
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21692..22210
DNA (519bp) protein (173aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
signal peptidase I (EC:3.4.21.89)
NECEvent2014_6_3_scaffold_173_27
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22281..22529
DNA (249bp) protein (83aa)
permease
Permease; TaxID=991791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum DSM 1731.;"
NECEvent2014_6_3_scaffold_173_28
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22760..22942
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:EOR19961.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_6_3_scaffold_173_29
Enterococcus columbae, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23082..23450
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:EOW84634.1}; TaxID=1121865 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus columbae DSM 7374 =
NECEvent2014_6_3_scaffold_173_30
unknown

Not on your lists

23701..24870
DNA (1170bp) protein (390aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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