ggKbase home page

NECEvent2014_6_3_scaffold_241

Alias: 176_003_scaffold_241

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_3_scaffold_241_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48..1193
DNA (1146bp) protein (382aa)
cysteine desulfurase
Cysteine desulfurase {ECO:0000313|EMBL:KIL08341.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_3_scaffold_241_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1248..1838
DNA (591bp) protein (197aa)
yyaC3; putative sporulation protein YyaC
Putative sporulation protein YyaC {ECO:0000313|EMBL:AGX45464.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobuty
NECEvent2014_6_3_scaffold_241_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1866..2381)
DNA (516bp) protein (172aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45465.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_3_scaffold_241_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2421..3263)
DNA (843bp) protein (281aa)
spo0J; stage 0 sporulation protein J
Stage 0 sporulation protein J {ECO:0000313|EMBL:AIY83400.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sul
NECEvent2014_6_3_scaffold_241_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3277..4041)
DNA (765bp) protein (255aa)
Putative ATPase involved in chromosome partitioning {ECO:0000313|EMBL:CDG02934.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
soj; sporulation initiation inhibitor protein Soj
NECEvent2014_6_3_scaffold_241_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4174..4953)
DNA (780bp) protein (260aa)
noc; nucleoid occlusion protein
Nucleoid occlusion protein {ECO:0000313|EMBL:AIY82577.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sulliv
NECEvent2014_6_3_scaffold_241_7
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5087..5806)
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
rsmG; ribosomal RNA small subunit methyltransferase G (EC:2.1.1.-)
NECEvent2014_6_3_scaffold_241_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5822..7705)
DNA (1884bp) protein (628aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1415774 species="Bacte
mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
NECEvent2014_6_3_scaffold_241_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7718..9097)
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
trmE; tRNA modification GTPase TrmE
NECEvent2014_6_3_scaffold_241_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9409..10038)
DNA (630bp) protein (210aa)
putative RNA-binding protein
Putative RNA-binding protein {ECO:0000313|EMBL:AIY82669.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sull
NECEvent2014_6_3_scaffold_241_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10070..10858)
DNA (789bp) protein (263aa)
Protein translocase component YidC {ECO:0000313|EMBL:KHD13896.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
yidC; membrane insertase, YidC/Oxa1 family domain protein
NECEvent2014_6_3_scaffold_241_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10888..11097)
DNA (210bp) protein (70aa)
putative membrane protein insertion efficiency factor
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
NECEvent2014_6_3_scaffold_241_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11060..11446)
DNA (387bp) protein (129aa)
rnpA; ribonuclease P protein component RnpA (EC:3.1.26.5)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
NECEvent2014_6_3_scaffold_241_14
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11507..11641)
DNA (135bp) protein (45aa)
ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environ
NECEvent2014_6_3_scaffold_241_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12175..13530
DNA (1356bp) protein (452aa)
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
dnaA; chromosomal replication initiator protein DnaA
NECEvent2014_6_3_scaffold_241_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13789..14889
DNA (1101bp) protein (367aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1561 species="Bacteria
dnaN; DNA polymerase III, beta subunit (EC:2.7.7.7)
NECEvent2014_6_3_scaffold_241_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14920..15132
DNA (213bp) protein (71aa)
S4 domain protein YaaA {ECO:0000313|EMBL:EES50591.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
yaaA; S4 domain-containing protein YaaA
NECEvent2014_6_3_scaffold_241_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15191..16291
DNA (1101bp) protein (367aa)
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
recF; DNA replication and repair RecF family protein
NECEvent2014_6_3_scaffold_241_19
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16306..16566
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ00176.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_6_3_scaffold_241_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16620..18527
DNA (1908bp) protein (636aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1561 species="Bacteria; Firm
gyrB; DNA gyrase, B subunit (EC:5.99.1.3)
NECEvent2014_6_3_scaffold_241_21
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18549..21074
DNA (2526bp) protein (842aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
DNA gyrase subunit A
Displaying 21 items

View Taxonomy