ggKbase home page

NECEvent2014_6_3_scaffold_309

Alias: 176_003_scaffold_309

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_3_scaffold_309_trna_1
unknown

Not on your lists

comp(24..95)
DNA (72bp)
transferRNA
NECEvent2014_6_3_scaffold_309_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(220..813)
DNA (594bp) protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:AIY78812.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
NECEvent2014_6_3_scaffold_309_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

908..2143
DNA (1236bp) protein (412aa)
Flavoprotein {ECO:0000313|EMBL:KHD13922.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
flavo, family protein
NECEvent2014_6_3_scaffold_309_3
unknown

Not on your lists

comp(2063..2521)
DNA (459bp) protein (153aa)

This feature has no annotations

NECEvent2014_6_3_scaffold_309_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2636..2818)
DNA (183bp) protein (61aa)
hypothetical protein
Hybrid cluster-associated redox disulfide domain protein {ECO:0000313|EMBL:AIY80438.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
NECEvent2014_6_3_scaffold_309_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2908..4194)
DNA (1287bp) protein (429aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00
NECEvent2014_6_3_scaffold_309_6
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4364..5536
DNA (1173bp) protein (391aa)
Malate dehydrogenase {ECO:0000313|EMBL:ETD66929.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;
malate dehydrogenase
NECEvent2014_6_3_scaffold_309_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5805..6602)
DNA (798bp) protein (266aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000313|EMBL:KIL08327.1}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};;
NECEvent2014_6_3_scaffold_309_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6624..7958)
DNA (1335bp) protein (445aa)
dnaC; replicative DNA helicase DnaC (EC:3.6.4.12)
Replicative DNA helicase DnaC {ECO:0000313|EMBL:AGX45451.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AGX45451.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
NECEvent2014_6_3_scaffold_309_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7981..9876)
DNA (1896bp) protein (632aa)
ATPase AAA {ECO:0000313|EMBL:KJU71769.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
lonC; ATP-dependent protease, Lon family
NECEvent2014_6_3_scaffold_309_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9889..10335)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostr
rplI; 50S ribosomal protein L9
NECEvent2014_6_3_scaffold_309_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10337..12280)
DNA (1944bp) protein (648aa)
DHH family protein {ECO:0000313|EMBL:AIY81665.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
DHH family protein
NECEvent2014_6_3_scaffold_309_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12296..12628)
DNA (333bp) protein (111aa)
hypothetical protein
MazG-like family protein {ECO:0000313|EMBL:KIL08333.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_3_scaffold_309_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12808..13053)
DNA (246bp) protein (82aa)
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.
rpsR; ribosomal protein S18
NECEvent2014_6_3_scaffold_309_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13080..13538)
DNA (459bp) protein (153aa)
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1351755 species="Bacteria; Firmicutes; Clostri
ssb; single-stranded DNA-binding family protein
NECEvent2014_6_3_scaffold_309_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13553..13840)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str.
rpsF; 30S ribosomal protein S6
NECEvent2014_6_3_scaffold_309_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13939..14133)
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI91985.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_6_3_scaffold_309_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14133..15020)
DNA (888bp) protein (296aa)
mechanosensitive ion channel family protein
Mechanosensitive ion channel protein {ECO:0000313|EMBL:KIL08338.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_3_scaffold_309_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15032..15271)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ30292.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein DUF3343
Displaying 19 items

View Taxonomy