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NECEvent2014_6_3_scaffold_81_1

Organism: NECEvent2014_6_3_Clostridium_paraputrificum_29_53

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 16 / 38 MC: 1
Location: 46..1860

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator (PAS, AAA-type ATPase, and DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ55052.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 590.0
  • Bit_score: 707
  • Evalue 1.80e-200
sigma-54-dependent transcriptional regulator YgeV similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 585.0
  • Bit_score: 677
  • Evalue 4.00e-192

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Taxonomy

Clostridium sp. Maddingley MBC34-26 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1815
ATGGTATTCAGGTATAAAGATGGAGAGAAGTACATATGGGAGGACAAGATGATTAAGTTACGTCTTAAAGATATAAGTAAAGTTGTTAATAGATATGCAAAAGTTATTTCAAGTATTGTAAATATCGATGTTGAGATAGTTGATGAGAATTTAATTAGAATAGCTGGAACTGGATTATATAGTAATAAAGTTAATGAGAGTATAGATAAGGTTGGATATGTTTATAAGCATGCATTAGCTACAGGAGAAATTCAAATTATTAATAATCCAGGAGAAAATGAATTATGTAAAAACTGTGAGCAATGCGGAAATTGTATAGAAGAGATGGAGATATGTGTTCCAATAAAATATAAGGATGAGACATTTGGAATTATTGGATTAATTTGCAGTAGCTATGATCAAAAGAAGAGACTAGAAGGTAATTTAACTAATATGGTATCATTCTTAGAGCAAATTGGGGAGTTAATTGCAGCAAAAATAATTGAAGAGAATGAAGTTGAGTTAAGTCGGTTGAATCTAAGTTTCTTAAAACAAATATTGGATTCTGTTGATAATGGCGTAATACCCATAAAGAGAGATGGTACAATACAAAATATTAATTACTGTGGATTAAAAGAACTAAAACTGAGCCCAAGTGTAATAGGTAAAAATATAGAAATTACCGAGGTAGAGGAGTATTATCACGGAAATAGAACTTTTAAAATAACAATTGAAGAAAAAGAATTTAATGTTGTTGGCAAGCTTATTCCCAATGTAGTTGGCATAGATGAATGTGATAAGATATTGATATTTAATAAGTTACATAAGTTACAAGAGGATGCCTTAAATATTTCTTTAGGGGATAATAAAACAAATACGAAGTCAATTTTAGGAGAATCAAAAGCAATAAAATCATTAAAAAATAAAGTTAAAAGAATAGCAGATTCAAAATCTACTGTATTAATAACTGGAGAAAGTGGAACAGGAAAAGAATTAGTGGCAAGAGCTATTCATTCAGAAAGCGATAGAAAAAATAAACCATTTATAGCAATTAACTGTGGAGCAATTCCTGAAACTCTTCTTGAAAGTGAATTGTTTGGATATGTTAAAGGTGCTTTTTCAGGGGCAAGTTCTAGTGGAAGAATAGGTAAGTTTGAGTTAGCAAATAAAGGTGTAATATTTTTAGATGAAATAGGAGACATGCCTTTATATCTCCAAGTAAAGTTATTGAGGGTATTGCAAGAAAGAGTAGTTGTTAGAATTGGGTCAAATCAATTACAACACTTGGATATAAGAGTTATAGCTGCAACTAATAAAAATCTAAAAGAACTTGTAAAGGAAGGAAAGTTCAGAGAGGATTTATATTATAGGCTTAATGTAATTCCTATAGAGGTACCTCCCCTTAGAGATAGGGAAGATGATATAGATATTATTACAAAGGGATTATTAAATAAATATAACCAAATTTATAATAAATATGTTCATACAATTGATGATGACGTGAGAAATATGATGCATAAATATAGTTGGCCAGGAAATATACGAGAATTAGAAAATGTTGTTGAGTTTATGGTAAGTCTTTCTAATGAAAGTGGAATAGTAAAGAGAAGTATGCTACCTAAATCCTTTGTTGATGCATATCAAGAAGAAAAGGATAAAAATAAATTTAGTTTTTTAGAGAATAATGAAATAAGAACATTAAAGGATATTGAAAAGCAGTATATAACTAAGGTTTTGGAGGAATATGGTTACGATACAGAAGGAAAGAAAAAAGCTGCAAAAAAATTAGGTATTGGACTAGCTACACTTTATAGAAAGCTAGATGATATGAAATGA
PROTEIN sequence
Length: 605
MVFRYKDGEKYIWEDKMIKLRLKDISKVVNRYAKVISSIVNIDVEIVDENLIRIAGTGLYSNKVNESIDKVGYVYKHALATGEIQIINNPGENELCKNCEQCGNCIEEMEICVPIKYKDETFGIIGLICSSYDQKKRLEGNLTNMVSFLEQIGELIAAKIIEENEVELSRLNLSFLKQILDSVDNGVIPIKRDGTIQNINYCGLKELKLSPSVIGKNIEITEVEEYYHGNRTFKITIEEKEFNVVGKLIPNVVGIDECDKILIFNKLHKLQEDALNISLGDNKTNTKSILGESKAIKSLKNKVKRIADSKSTVLITGESGTGKELVARAIHSESDRKNKPFIAINCGAIPETLLESELFGYVKGAFSGASSSGRIGKFELANKGVIFLDEIGDMPLYLQVKLLRVLQERVVVRIGSNQLQHLDIRVIAATNKNLKELVKEGKFREDLYYRLNVIPIEVPPLRDREDDIDIITKGLLNKYNQIYNKYVHTIDDDVRNMMHKYSWPGNIRELENVVEFMVSLSNESGIVKRSMLPKSFVDAYQEEKDKNKFSFLENNEIRTLKDIEKQYITKVLEEYGYDTEGKKKAAKKLGIGLATLYRKLDDMK*