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NECEvent2014_6_3_scaffold_81

Alias: 176_003_scaffold_81

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_3_scaffold_81_1
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46..1860
DNA (1815bp) protein (605aa)
Transcriptional regulator (PAS, AAA-type ATPase, and DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ55052.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost
sigma-54-dependent transcriptional regulator YgeV
NECEvent2014_6_3_scaffold_81_2
unknown

Not on your lists

2014..2109
DNA (96bp) protein (32aa)

This feature has no annotations

NECEvent2014_6_3_scaffold_81_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2102..3307
DNA (1206bp) protein (402aa)
dpaL; diaminopropionate ammonia-lyase (EC:4.3.1.15)
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:AIY79212.1}; EC=4.3.1.15 {ECO:0000313|EMBL:AIY79212.1};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
NECEvent2014_6_3_scaffold_81_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3327..4514
DNA (1188bp) protein (396aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:EKQ55056.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
putative peptidase, M20 family
NECEvent2014_6_3_scaffold_81_5
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4531..6114
DNA (1584bp) protein (528aa)
putative D-aminoacylase (EC:3.5.1.81)
D-aminoacylase {ECO:0000313|EMBL:ERK29144.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
NECEvent2014_6_3_scaffold_81_6
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6131..7456
DNA (1326bp) protein (442aa)
Chlorohydrolase/aminohydrolase {ECO:0000313|EMBL:ERK29009.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URN
chlorohydrolase/aminohydrolase
NECEvent2014_6_3_scaffold_81_7
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7478..8845
DNA (1368bp) protein (456aa)
Xanthine/uracil permease family protein {ECO:0000313|EMBL:KAJ52946.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetano
xanthine permease
NECEvent2014_6_3_scaffold_81_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8863..9951
DNA (1089bp) protein (363aa)
dihydroorotate dehydrogenase family protein
Diguanylate cyclase {ECO:0000313|EMBL:KIL08846.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_3_scaffold_81_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9965..11377
DNA (1413bp) protein (471aa)
Dihydropyrimidinase {ECO:0000313|EMBL:EQE59655.1}; EC=3.5.2.2 {ECO:0000313|EMBL:EQE59655.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
dihydropyrimidinase (EC:3.5.2.2)
NECEvent2014_6_3_scaffold_81_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11364..13922
DNA (2559bp) protein (853aa)
selenium-dependent molybdenum hydroxylase 1
Aldehyde oxidoreductase {ECO:0000313|EMBL:KIL08851.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_3_scaffold_81_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13948..14331
DNA (384bp) protein (128aa)
yabJ; rutC family protein yabJ
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EKY23226.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 178
NECEvent2014_6_3_scaffold_81_12
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14377..14916
DNA (540bp) protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:KEI11081.1}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi B str. NCTC 9691
hypothetical protein
NECEvent2014_6_3_scaffold_81_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14925..15950
DNA (1026bp) protein (342aa)
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIL08857.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bo
iron ABC transporter substrate-binding protein
NECEvent2014_6_3_scaffold_81_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15947..16933
DNA (987bp) protein (329aa)
iron chelate uptake ABC transporter permease
ABC 3 transport family protein {ECO:0000313|EMBL:AIY79058.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.
NECEvent2014_6_3_scaffold_81_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17014..17715
DNA (702bp) protein (234aa)
putative iron ABC transporter ATP-binding protein
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIL08859.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinu
NECEvent2014_6_3_scaffold_81_16
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17709..18305
DNA (597bp) protein (199aa)
Uncharacterized protein {ECO:0000313|EMBL:EHI97737.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
putative MobA-like protein
NECEvent2014_6_3_scaffold_81_17
unknown

Not on your lists

18399..18731
DNA (333bp) protein (111aa)

This feature has no annotations

NECEvent2014_6_3_scaffold_81_18
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18765..19307)
DNA (543bp) protein (181aa)
Heat shock protein DnaJ domain-containing protein {ECO:0000313|EMBL:CDB75322.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samp
heat shock protein DnaJ domain-containing protein
NECEvent2014_6_3_scaffold_81_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19332..20198)
DNA (867bp) protein (289aa)
Uncharacterized protein {ECO:0000313|EMBL:CDG01106.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_6_3_scaffold_81_20
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20208..21119)
DNA (912bp) protein (304aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ88158.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
patatin-like phospholipase
NECEvent2014_6_3_scaffold_81_21
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21440..23689
DNA (2250bp) protein (750aa)
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EEG28934.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] met
metallophosphoesterase
NECEvent2014_6_3_scaffold_81_22
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23879..25636
DNA (1758bp) protein (586aa)
Putative Helicase domain-containing protein {ECO:0000313|EMBL:CDG01116.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ch
ATP-dependent RNA helicase, superfamily II
NECEvent2014_6_3_scaffold_81_23
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25710..25973)
DNA (264bp) protein (88aa)
Coat F domain protein {ECO:0000313|EMBL:KJJ66078.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
coat F domain protein
NECEvent2014_6_3_scaffold_81_24
unknown

Not on your lists

comp(25986..26162)
DNA (177bp) protein (59aa)

This feature has no annotations

NECEvent2014_6_3_scaffold_81_25
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26339..27217
DNA (879bp) protein (293aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF59195.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_6_3_scaffold_81_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27278..28039)
DNA (762bp) protein (254aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH98872.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
zinc transporter ZupT
NECEvent2014_6_3_scaffold_81_27
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28192..29292
DNA (1101bp) protein (367aa)
Conserved membrane protein {ECO:0000313|EMBL:CCJ34059.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
ytvI; sporulation integral membrane protein YtvI
NECEvent2014_6_3_scaffold_81_28
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29381..30679
DNA (1299bp) protein (433aa)
hom; homoserine dehydrogenase Hom (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
NECEvent2014_6_3_scaffold_81_29
Carnobacterium maltaromaticum, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30702..31031)
DNA (330bp) protein (110aa)
azlD; branched-chain amino acid transport family protein
Branched-chain amino acid transport family protein {ECO:0000313|EMBL:CCO09838.2}; TaxID=1234679 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Ca
NECEvent2014_6_3_scaffold_81_30
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31033..31764)
DNA (732bp) protein (244aa)
AzlC family protein
AzlC family protein {ECO:0000313|EMBL:ABK15896.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophob
Displaying items 1-30 of 57 in total

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