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NECEvent2014_6_3_scaffold_265_6

Organism: NECEvent2014_6_3_Clostridium_paraputrificum_29_53

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 16 / 38 MC: 1
Location: comp(4687..5487)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:EQK38626.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[ similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 266.0
  • Bit_score: 464
  • Evalue 1.20e-127
RpiR family phosphosugar-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 266.0
  • Bit_score: 285
  • Evalue 1.50e-74

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Taxonomy

[Clostridium] bifermentans → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 801
TTGAACATTATATGCGAGATACAACAAAAATATAATAATTTTTCAGATAAAGAAAAAGCTATTGCTGATTATATCTTAAATCAACCTGATATGATTAAAAATATAAATATAACAGAATTAGCTAAAATAATAGGCACTTCTGGTGCTACTATTACTAGATTTTCTAAAAAAATTGGCTGCGATAGCTTTGTTGAAATGAAAATGCAGATTAATTTAAGTACTAATGATAGCGAATCTATTGATAGTGATGATATTTTTTCAAGTGTCTATAGTCATTACAATGAAGTAATTGAAAGAACAAATTCAATTATAGATAAATCCGCTATATTTAATATAGTTGAAGAAATAAAAAAGGCTAATAAAATATATCTTTATGGAGTTGGTAGTTCTGGTTTAACAGCTACTGAAATGATGCAAAGATTAATAAGAATGGGATTTAATATACATTGTATCTCAGACTCTCATATGATGATTATTAATAGTTCAATAGCATCCTCAGAAGACCTTGTTATAGGATTATCTATATCAGGTGAAACAAAAGAGGTTGTAAATGCTTTAAAGGTTTCTAAGAGAAATGGTGCTAAAACTGCTTGTATAACAAGCTTTGATGAAAGTTCAGTAACAGTCTATTCGGATATAATATTAAAAGTTTATAATACTCGTTTCATAGGTAGACATAAGTTTATAAACTCTCAGTTTTCTACTATGTATCTTTTAGATTTAATATCTACTGTATTATTAGAAGATAAAAACTTAGAAGAAAAAATGCAAATAACTATAGATGCCATAATTAATTCATAA
PROTEIN sequence
Length: 267
LNIICEIQQKYNNFSDKEKAIADYILNQPDMIKNINITELAKIIGTSGATITRFSKKIGCDSFVEMKMQINLSTNDSESIDSDDIFSSVYSHYNEVIERTNSIIDKSAIFNIVEEIKKANKIYLYGVGSSGLTATEMMQRLIRMGFNIHCISDSHMMIINSSIASSEDLVIGLSISGETKEVVNALKVSKRNGAKTACITSFDESSVTVYSDIILKVYNTRFIGRHKFINSQFSTMYLLDLISTVLLEDKNLEEKMQITIDAIINS*