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NECEvent2014_6_3_scaffold_265

Alias: 176_003_scaffold_265

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_3_scaffold_265_trna_1
unknown

Not on your lists

106..178
DNA (73bp)
transferRNA
NECEvent2014_6_3_scaffold_265_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(539..2212)
DNA (1674bp) protein (558aa)
Putative alkyl hydroperoxide reductase F subunit {ECO:0000313|EMBL:CDG00839.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
pyridine nucleotide-disulfide oxidoreductase
NECEvent2014_6_3_scaffold_265_2
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2320..2883)
DNA (564bp) protein (188aa)
ahpC; Alkyl hydroperoxide reductase subunit C (EC:1.11.1.15)
Putative Peroxiredoxin {ECO:0000313|EMBL:CDG00840.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
NECEvent2014_6_3_scaffold_265_3
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3099..3452
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ85297.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_6_3_scaffold_265_4
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3461..4228
DNA (768bp) protein (256aa)
hypothetical protein
UPF0246 protein Ftrac_0723 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strai
NECEvent2014_6_3_scaffold_265_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4241..4627
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:EOR27253.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_6_3_scaffold_265_6
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4687..5487)
DNA (801bp) protein (267aa)
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:EQK38626.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[
RpiR family phosphosugar-binding transcriptional regulator
NECEvent2014_6_3_scaffold_265_7
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5595..6239)
DNA (645bp) protein (215aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=123
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
NECEvent2014_6_3_scaffold_265_8
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6259..7749)
DNA (1491bp) protein (497aa)
PTS system, glucose-like IIB component domain protein {ECO:0000313|EMBL:EQK38624.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQK38624.1};; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
PTS system IIB component, Glc family
NECEvent2014_6_3_scaffold_265_9
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7987..9792)
DNA (1806bp) protein (602aa)
CotH protein
CotH protein {ECO:0000313|EMBL:AGL00520.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibso
NECEvent2014_6_3_scaffold_265_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9856..10542)
DNA (687bp) protein (229aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE46339.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.
hypothetical protein
NECEvent2014_6_3_scaffold_265_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10557..11240)
DNA (684bp) protein (228aa)
HesA/MoeB/ThiF family protein {ECO:0000313|EMBL:EDT72067.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str
hypothetical protein
NECEvent2014_6_3_scaffold_265_12
Bacillus sonorensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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11480..12313
DNA (834bp) protein (278aa)
Transcriptional antiterminator LicT {ECO:0000313|EMBL:EME73752.1}; TaxID=1274524 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sonorensis L12.;"
licT; transcriptional antiterminator (BglG family) protein
NECEvent2014_6_3_scaffold_265_13
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12511..14367
DNA (1857bp) protein (619aa)
bglP; PTS system beta-glucoside-specific EIIBCA component (EC:2.7.1.69) rbh
PTS system beta-glucoside-specific EIIBCA component {ECO:0000313|EMBL:CDM68914.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDM68914.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; C
NECEvent2014_6_3_scaffold_265_14
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

14386..15816
DNA (1431bp) protein (477aa)
Aryl-phospho-beta-D-glucosidase BglH {ECO:0000313|EMBL:ERT66981.1}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATC
glycoside hydrolase family 1
NECEvent2014_6_3_scaffold_265_15
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15952..16635
DNA (684bp) protein (228aa)
Transcriptional regulator {ECO:0000313|EMBL:KJF27732.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
winged helix family two component transcriptional regulator
NECEvent2014_6_3_scaffold_265_16
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16638..17861
DNA (1224bp) protein (408aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
hypothetical protein
NECEvent2014_6_3_scaffold_265_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18084..18893
DNA (810bp) protein (270aa)
Membrane protein {ECO:0000313|EMBL:EOR27080.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
Displaying 18 items

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