ggKbase home page

NECEvent2014_6_4_scaffold_67

Alias: 176_004_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_67_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..631
DNA (630bp) protein (210aa)
cell wall surface anchor family protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:EDS81687.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
Cell wall surface anchor family protein {ECO:0000313|EMBL:EDS81687.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_6_4_scaffold_67_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(712..1113)
DNA (402bp) protein (134aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13451.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
Uncharacterized protein {ECO:0000313|EMBL:EDT13451.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_6_4_scaffold_67_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1649..2017
DNA (369bp) protein (123aa)
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT13456.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
Putative membrane protein {ECO:0000313|EMBL:EDT13456.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
NECEvent2014_6_4_scaffold_67_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2270..3703
DNA (1434bp) protein (478aa)
Transporter, monovalent cation:proton antiporter-2 (CPA2) family {ECO:0000313|EMBL:EDT70745.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Transporter, monovalent cation:proton antiporter-2 (CPA2) family {ECO:0000313|EMBL:EDT70745.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
cvrA, nhaP2, ycgO; potassium/proton antiporter
NECEvent2014_6_4_scaffold_67_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3828..4859
DNA (1032bp) protein (344aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82300.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
Uncharacterized protein {ECO:0000313|EMBL:BAB82300.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_4_scaffold_67_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4996..5802
DNA (807bp) protein (269aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82299.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
Uncharacterized protein {ECO:0000313|EMBL:BAB82299.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_4_scaffold_67_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6016..6354
DNA (339bp) protein (113aa)
phnA; phnA family protein
Alkylphosphonate uptake protein {ECO:0000313|EMBL:BAB82298.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (st
Alkylphosphonate uptake protein {ECO:0000313|EMBL:BAB82298.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (st
NECEvent2014_6_4_scaffold_67_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6712..8877
DNA (2166bp) protein (722aa)
Phage infection protein {ECO:0000313|EMBL:BAB82297.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
Phage infection protein {ECO:0000313|EMBL:BAB82297.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
phage infection protein
NECEvent2014_6_4_scaffold_67_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8900..11056
DNA (2157bp) protein (719aa)
Putative phage infection protein {ECO:0000313|EMBL:EDT13450.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
Putative phage infection protein {ECO:0000313|EMBL:EDT13450.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
phage infection protein
NECEvent2014_6_4_scaffold_67_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11185..12669
DNA (1485bp) protein (495aa)
N-6 DNA methylase
N-6 DNA methylase {ECO:0000313|EMBL:EDS81702.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
N-6 DNA methylase {ECO:0000313|EMBL:EDS81702.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
NECEvent2014_6_4_scaffold_67_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12671..13144)
DNA (474bp) protein (158aa)
msrA; methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000255|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000255|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000255|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA {ECO:0000255|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000255|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000255|HAMAP-Rule:MF_014
NECEvent2014_6_4_scaffold_67_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13196..13783)
DNA (588bp) protein (196aa)
Maltose transacetylase {ECO:0000313|EMBL:EDT70024.1}; EC=2.3.1.79 {ECO:0000313|EMBL:EDT70024.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Maltose transacetylase {ECO:0000313|EMBL:EDT70024.1}; EC=2.3.1.79 {ECO:0000313|EMBL:EDT70024.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
maa; maltose transacetylase (EC:2.3.1.79)
NECEvent2014_6_4_scaffold_67_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13916..14704
DNA (789bp) protein (263aa)
Uncharacterized protein {ECO:0000313|EMBL:EIA15892.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Uncharacterized protein {ECO:0000313|EMBL:EIA15892.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_6_4_scaffold_67_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14747..16024)
DNA (1278bp) protein (426aa)
Nucleoside recognition domain-containing protein {ECO:0000313|EMBL:EIA15891.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
Nucleoside recognition domain-containing protein {ECO:0000313|EMBL:EIA15891.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
nucleoside recognition domain-containing protein
NECEvent2014_6_4_scaffold_67_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16401..18050
DNA (1650bp) protein (550aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:000
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:000
hydroxylamine reductase
NECEvent2014_6_4_scaffold_67_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18116..18343)
DNA (228bp) protein (76aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15356.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
Uncharacterized protein {ECO:0000313|EMBL:EDT15356.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_6_4_scaffold_67_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18434..19726)
DNA (1293bp) protein (431aa)
xanthine/uracil permease
Xanthine/uracil permease family protein {ECO:0000313|EMBL:EDT15382.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
Xanthine/uracil permease family protein {ECO:0000313|EMBL:EDT15382.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_6_4_scaffold_67_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19911..20684
DNA (774bp) protein (258aa)
Oxidoreductase, short-chain dehydrogenase/reductase family {ECO:0000313|EMBL:EDT24225.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
Oxidoreductase, short-chain dehydrogenase/reductase family {ECO:0000313|EMBL:EDT24225.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
oxidoreductase, short-chain dehydrogenase/reductase
NECEvent2014_6_4_scaffold_67_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20748..21626
DNA (879bp) protein (293aa)
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EDT24256.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EDT24256.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
oxidoreductase, short chain dehydrogenase/reductase
NECEvent2014_6_4_scaffold_67_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21713..22522
DNA (810bp) protein (270aa)
proB; gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
NECEvent2014_6_4_scaffold_67_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22525..23772
DNA (1248bp) protein (416aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
proA; gamma-glutamyl phosphate reductase
NECEvent2014_6_4_scaffold_67_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23874..24185
DNA (312bp) protein (104aa)
PTS system, lactose/cellobiose-specific IIA component {ECO:0000313|EMBL:EDT24267.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
PTS system, lactose/cellobiose-specific IIA component {ECO:0000313|EMBL:EDT24267.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
PTS system protein
NECEvent2014_6_4_scaffold_67_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24486..25103
DNA (618bp) protein (206aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=451754 sp
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=451754 sp
3-methyladenine DNA glycosylase (EC:3.2.2.-)
NECEvent2014_6_4_scaffold_67_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25172..26644
DNA (1473bp) protein (491aa)
[Fe] hydrogenase
Probable hydrogenase {ECO:0000313|EMBL:BAB82281.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / T
Probable hydrogenase {ECO:0000313|EMBL:BAB82281.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / T
NECEvent2014_6_4_scaffold_67_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26899..27555)
DNA (657bp) protein (219aa)
Conserved domain protein {ECO:0000313|EMBL:EDT24240.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
Conserved domain protein {ECO:0000313|EMBL:EDT24240.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
hypothetical protein
NECEvent2014_6_4_scaffold_67_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28213..29262
DNA (1050bp) protein (350aa)
carA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
NECEvent2014_6_4_scaffold_67_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29275..32478
DNA (3204bp) protein (1068aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
NECEvent2014_6_4_scaffold_67_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33093..33734
DNA (642bp) protein (214aa)
VanZ like family protein
VanZ family protein {ECO:0000313|EMBL:ABG86991.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 /
VanZ family protein {ECO:0000313|EMBL:ABG86991.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 /
NECEvent2014_6_4_scaffold_67_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33974..34258
DNA (285bp) protein (95aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15368.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
Uncharacterized protein {ECO:0000313|EMBL:EDT15368.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_6_4_scaffold_67_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34348..36249)
DNA (1902bp) protein (634aa)
Probable glutamine synthetase {ECO:0000313|EMBL:BAB82275.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
Probable glutamine synthetase {ECO:0000313|EMBL:BAB82275.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
glutamine synthetase
Displaying items 1-30 of 72 in total

View Taxonomy