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NECEvent2014_6_4_scaffold_109

Alias: 176_004_scaffold_109

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_109_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

74..1387
DNA (1314bp) protein (438aa)
Putative membrane protein {ECO:0000313|EMBL:EDS80822.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JG
Putative membrane protein {ECO:0000313|EMBL:EDS80822.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JG
hypothetical protein
NECEvent2014_6_4_scaffold_109_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1511..1723)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:EIA18546.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Uncharacterized protein {ECO:0000313|EMBL:EIA18546.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_6_4_scaffold_109_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2087..2710)
DNA (624bp) protein (208aa)
CutC family protein {ECO:0000313|EMBL:EDT26618.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.
CutC family protein {ECO:0000313|EMBL:EDT26618.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.
CutC family protein
NECEvent2014_6_4_scaffold_109_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2707..3843)
DNA (1137bp) protein (379aa)
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EDS80876.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EDS80876.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_6_4_scaffold_109_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4027..4533)
DNA (507bp) protein (169aa)
CarD family transcriptional regulator {ECO:0000313|EMBL:EIA18543.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
CarD family transcriptional regulator {ECO:0000313|EMBL:EIA18543.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
CarD family transcriptional regulator
NECEvent2014_6_4_scaffold_109_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4753..5367)
DNA (615bp) protein (205aa)
lacA; galactoside O-acetyltransferase (EC:2.3.1.18)
Galactoside O-acetyltransferase {ECO:0000313|EMBL:EDS80877.1}; EC=2.3.1.18 {ECO:0000313|EMBL:EDS80877.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
Galactoside O-acetyltransferase {ECO:0000313|EMBL:EDS80877.1}; EC=2.3.1.18 {ECO:0000313|EMBL:EDS80877.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
NECEvent2014_6_4_scaffold_109_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5626..6768)
DNA (1143bp) protein (381aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26605.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
Uncharacterized protein {ECO:0000313|EMBL:EDT26605.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_6_4_scaffold_109_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6984..7715
DNA (732bp) protein (244aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=451755 spec
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=451755 spec
NAD-dependent deacetylase
NECEvent2014_6_4_scaffold_109_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7852..8166
DNA (315bp) protein (105aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79961.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
Uncharacterized protein {ECO:0000313|EMBL:BAB79961.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_4_scaffold_109_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8251..8499)
DNA (249bp) protein (83aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86734.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
Uncharacterized protein {ECO:0000313|EMBL:ABG86734.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_6_4_scaffold_109_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8512..8715)
DNA (204bp) protein (68aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79959.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
Uncharacterized protein {ECO:0000313|EMBL:BAB79959.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_4_scaffold_109_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8835..9281
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:EIA18538.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Uncharacterized protein {ECO:0000313|EMBL:EIA18538.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_6_4_scaffold_109_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9354..10676)
DNA (1323bp) protein (441aa)
lipoprotein
Phosphoserine phosphatase {ECO:0000313|EMBL:EIA18537.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Phosphoserine phosphatase {ECO:0000313|EMBL:EIA18537.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_4_scaffold_109_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10991..11764)
DNA (774bp) protein (258aa)
capsular polysaccharide biosynthesis protein
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDT23561.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDT23561.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
NECEvent2014_6_4_scaffold_109_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12036..12770)
DNA (735bp) protein (245aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT23547.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
Uncharacterized protein {ECO:0000313|EMBL:EDT23547.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_6_4_scaffold_109_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12788..14515)
DNA (1728bp) protein (576aa)
DnaK family protein {ECO:0000313|EMBL:EDT23526.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 362
molecular chaperone DnaK
DnaK family protein {ECO:0000313|EMBL:EDT23526.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 362
NECEvent2014_6_4_scaffold_109_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14503..15105)
DNA (603bp) protein (201aa)
co-chaperone GrpE
Putative co-chaperone GrpE {ECO:0000313|EMBL:EDT23562.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. A
Putative co-chaperone GrpE {ECO:0000313|EMBL:EDT23562.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. A
NECEvent2014_6_4_scaffold_109_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15123..16391)
DNA (1269bp) protein (423aa)
dnaJ domain-containing protein
DnaJ domain protein {ECO:0000313|EMBL:EDT23559.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 362
DnaJ domain protein {ECO:0000313|EMBL:EDT23559.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 362
NECEvent2014_6_4_scaffold_109_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16645..18972
DNA (2328bp) protein (776aa)
GGDEF/EAL domain protein {ECO:0000313|EMBL:EDT23557.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
GGDEF/EAL domain protein {ECO:0000313|EMBL:EDT23557.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
diguanylate cyclase
NECEvent2014_6_4_scaffold_109_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19376..20011
DNA (636bp) protein (212aa)
HAD family hydrolase
HAD-superfamily hydrolase, subfamily IB {ECO:0000313|EMBL:EDT23563.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
HAD-superfamily hydrolase, subfamily IB {ECO:0000313|EMBL:EDT23563.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_6_4_scaffold_109_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20021..20359
DNA (339bp) protein (113aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS81644.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
Uncharacterized protein {ECO:0000313|EMBL:EDS81644.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
NECEvent2014_6_4_scaffold_109_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20352..20684
DNA (333bp) protein (111aa)
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT14660.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
Putative membrane protein {ECO:0000313|EMBL:EDT14660.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
NECEvent2014_6_4_scaffold_109_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20829..22307
DNA (1479bp) protein (493aa)
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT26644.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
Putative membrane protein {ECO:0000313|EMBL:EDT26644.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
NECEvent2014_6_4_scaffold_109_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22300..23175
DNA (876bp) protein (292aa)
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase {ECO:0000313|EMBL:EIA18524.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase {ECO:0000313|EMBL:EIA18524.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
NECEvent2014_6_4_scaffold_109_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23232..23924)
DNA (693bp) protein (231aa)
Conserved domain protein {ECO:0000313|EMBL:EDS80875.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS
Conserved domain protein {ECO:0000313|EMBL:EDS80875.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS
hypothetical protein
NECEvent2014_6_4_scaffold_109_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23927..25357)
DNA (1431bp) protein (477aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT26626.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
Uncharacterized protein {ECO:0000313|EMBL:EDT26626.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_6_4_scaffold_109_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25775..26551)
DNA (777bp) protein (259aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79945.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
Uncharacterized protein {ECO:0000313|EMBL:BAB79945.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_4_scaffold_109_trna_1
unknown

Not on your lists

26724..26796
DNA (73bp)
transferRNA
NECEvent2014_6_4_scaffold_109_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26925..27452)
DNA (528bp) protein (176aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14626.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
Uncharacterized protein {ECO:0000313|EMBL:EDT14626.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_6_4_scaffold_109_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27705..28904)
DNA (1200bp) protein (400aa)
Transporter, monovalent cation:proton antiporter-2 (CPA2) family {ECO:0000313|EMBL:EDT14683.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Transporter, monovalent cation:proton antiporter-2 (CPA2) family {ECO:0000313|EMBL:EDT14683.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
monovalent cation:proton antiporter-2 (CPA2) family protein
Displaying items 1-30 of 58 in total

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