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NECEvent2014_6_4_scaffold_448

Alias: 176_004_scaffold_448

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_448_1
unknown

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484..855
DNA (372bp) protein (124aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_448_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(852..1013)
DNA (162bp) protein (54aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86297.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
Uncharacterized protein {ECO:0000313|EMBL:ABG86297.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_6_4_scaffold_448_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1124..1699
DNA (576bp) protein (192aa)
BRO domain protein {ECO:0000313|EMBL:EDS79664.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;
BRO domain protein {ECO:0000313|EMBL:EDS79664.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;
BRO domain-containing protein
NECEvent2014_6_4_scaffold_448_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2227..2778
DNA (552bp) protein (184aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
RNA 2'-phosphotransferase-like protein
NECEvent2014_6_4_scaffold_448_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3069..3914
DNA (846bp) protein (282aa)
hypothetical protein
Glucuronate isomerase {ECO:0000313|EMBL:EDT15529.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS198
Glucuronate isomerase {ECO:0000313|EMBL:EDT15529.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS198
NECEvent2014_6_4_scaffold_448_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3943..4968
DNA (1026bp) protein (342aa)
2-keto-3-deoxygluconate kinase
2-keto-3-deoxygluconate kinase {ECO:0000313|EMBL:EDT15461.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
2-keto-3-deoxygluconate kinase {ECO:0000313|EMBL:EDT15461.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
NECEvent2014_6_4_scaffold_448_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5032..6831
DNA (1800bp) protein (600aa)
Beta-glucuronidase {ECO:0000313|EMBL:BAB79853.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Typ
bglR; beta-D-glucuronidase
Beta-glucuronidase {ECO:0000313|EMBL:BAB79853.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Typ
NECEvent2014_6_4_scaffold_448_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6974..7663
DNA (690bp) protein (230aa)
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB79854.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
Probable transcriptional regulator {ECO:0000313|EMBL:BAB79854.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_6_4_scaffold_448_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7853..8704
DNA (852bp) protein (284aa)
D-mannonate oxidoreductase (EC:1.1.1.131)
D-mannonate oxidoreductase {ECO:0000313|EMBL:EDS79657.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. J
D-mannonate oxidoreductase {ECO:0000313|EMBL:EDS79657.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. J
NECEvent2014_6_4_scaffold_448_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8719..9327
DNA (609bp) protein (203aa)
2-dehydro-3-deoxyphosphogluconate aldolase
2-dehydro-3-deoxyphosphogluconate/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:BAB79856.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
2-dehydro-3-deoxyphosphogluconate/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:BAB79856.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
NECEvent2014_6_4_scaffold_448_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9418..10470
DNA (1053bp) protein (351aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:00002
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:00002
uxuA; mannonate dehydratase (EC:4.2.1.8)
NECEvent2014_6_4_scaffold_448_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10490..11890
DNA (1401bp) protein (467aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HA
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HA
uxaC; glucuronate isomerase (EC:5.3.1.12)
NECEvent2014_6_4_scaffold_448_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12011..13402
DNA (1392bp) protein (464aa)
Glucuronide permease {ECO:0000313|EMBL:EDT27278.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969
Glucuronide permease {ECO:0000313|EMBL:EDT27278.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969
uidB; glucuronide permease
NECEvent2014_6_4_scaffold_448_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13462..15231
DNA (1770bp) protein (590aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
beta-hexosamidase A
Displaying 14 items

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