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NECEvent2014_6_4_scaffold_89

Alias: 176_004_scaffold_89

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_89_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(370..2013)
DNA (1644bp) protein (548aa)
Inorganic pyrophosphatase {ECO:0000313|EMBL:KJU70764.1}; EC=3.6.1.1 {ECO:0000313|EMBL:KJU70764.1};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Inorganic pyrophosphatase {ECO:0000313|EMBL:KJU70764.1}; EC=3.6.1.1 {ECO:0000313|EMBL:KJU70764.1};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
putative manganase-dependent inorganic pyrophosphatase
NECEvent2014_6_4_scaffold_89_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2345..4894
DNA (2550bp) protein (850aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:ENZ31438.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:ENZ31438.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
putative calcium-translocating P-type ATPase, PMCA-type
NECEvent2014_6_4_scaffold_89_3
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4961..6232)
DNA (1272bp) protein (424aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ84970.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
Uncharacterized protein {ECO:0000313|EMBL:KEZ84970.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_6_4_scaffold_89_4
unknown

Not on your lists

comp(6290..6403)
DNA (114bp) protein (38aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_89_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6415..6828)
DNA (414bp) protein (138aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU70767.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Uncharacterized protein {ECO:0000313|EMBL:KJU70767.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_4_scaffold_89_6
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7058..7291
DNA (234bp) protein (78aa)
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:ERI91274.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:ERI91274.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0
hydrogenase assembly chaperone hypC/hupF
NECEvent2014_6_4_scaffold_89_7
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7288..8358
DNA (1071bp) protein (357aa)
Hydrogenase isoenzymes formation protein HypD {ECO:0000313|EMBL:KAJ53358.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
Hydrogenase isoenzymes formation protein HypD {ECO:0000313|EMBL:KAJ53358.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
hypD; hypD hydrogenase expression/formation protein HypD
NECEvent2014_6_4_scaffold_89_8
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8373..9374
DNA (1002bp) protein (334aa)
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:ERI91276.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 st
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:ERI91276.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 st
hydrogenase expression/formation protein HypE
NECEvent2014_6_4_scaffold_89_9
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9391..9771
DNA (381bp) protein (127aa)
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:KAJ53360.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:KAJ53360.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum
NECEvent2014_6_4_scaffold_89_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9786..10868
DNA (1083bp) protein (361aa)
Respiratory-chain NADH dehydrogenase, subunit {ECO:0000313|EMBL:EKY29392.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium c
Respiratory-chain NADH dehydrogenase, subunit {ECO:0000313|EMBL:EKY29392.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium c
NiFe-hydrogenase III large subunit
NECEvent2014_6_4_scaffold_89_11
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10869..11210
DNA (342bp) protein (114aa)
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
hypA; hydrogenase nickel insertion protein HypA
NECEvent2014_6_4_scaffold_89_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11212..11862
DNA (651bp) protein (217aa)
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EKY29394.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EKY29394.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM
hydrogenase accessory protein HypB
NECEvent2014_6_4_scaffold_89_13
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11874..12404
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:CDB74235.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
Uncharacterized protein {ECO:0000313|EMBL:CDB74235.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_6_4_scaffold_89_14
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12404..12667
DNA (264bp) protein (88aa)
Monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:KAJ53365.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium teta
Monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:KAJ53365.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium teta
monovalent cation/H+ antiporter subunit F
NECEvent2014_6_4_scaffold_89_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12664..13011
DNA (348bp) protein (116aa)
Monovalent cation/proton antiporter, MnhG/PhaG subunit {ECO:0000313|EMBL:EKY29397.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
Monovalent cation/proton antiporter, MnhG/PhaG subunit {ECO:0000313|EMBL:EKY29397.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
Na(+)/H(+) antiporter subunit G
NECEvent2014_6_4_scaffold_89_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13004..13270
DNA (267bp) protein (89aa)
Monovalent cation/H+ antiporter subunit B domain protein {ECO:0000313|EMBL:EKY29398.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
Monovalent cation/H+ antiporter subunit B domain protein {ECO:0000313|EMBL:EKY29398.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
membrane bound hydrogenase subunit MbhD
NECEvent2014_6_4_scaffold_89_17
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13267..13557
DNA (291bp) protein (97aa)
Na+/H+ antiporter MnhB subunit-related protein {ECO:0000313|EMBL:KAJ53368.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
Na+/H+ antiporter MnhB subunit-related protein {ECO:0000313|EMBL:KAJ53368.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
membrane bound hydrogenase subunit MbhE
NECEvent2014_6_4_scaffold_89_18
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13544..14011
DNA (468bp) protein (156aa)
Na+/H+ antiporter MnhB subunit-related protein {ECO:0000313|EMBL:KAJ53368.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
Na+/H+ antiporter MnhB subunit-related protein {ECO:0000313|EMBL:KAJ53368.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
monovalent cation/H+ antiporter subunit B
NECEvent2014_6_4_scaffold_89_19
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14001..14345
DNA (345bp) protein (115aa)
Monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:KAJ53369.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium teta
Monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:KAJ53369.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium teta
monovalent cation/H+ antiporter subunit C
NECEvent2014_6_4_scaffold_89_20
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14342..16285
DNA (1944bp) protein (648aa)
Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 {ECO:0000313|EMBL:CDB74242.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environm
Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 {ECO:0000313|EMBL:CDB74242.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environm
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
NECEvent2014_6_4_scaffold_89_21
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16299..17279
DNA (981bp) protein (327aa)
Respiratory-chain NADH dehydrogenase subunit 1 {ECO:0000313|EMBL:KAJ53371.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
Respiratory-chain NADH dehydrogenase subunit 1 {ECO:0000313|EMBL:KAJ53371.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
cooK; carbon monoxide-induced hydrogenase subunit CooK
NECEvent2014_6_4_scaffold_89_22
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17294..17731
DNA (438bp) protein (146aa)
ech2C; Ech-type complex subunit Ech2C (EC:1.12.7.2)
Hydrogenase-4 subunit I {ECO:0000313|EMBL:KAJ53372.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.
Hydrogenase-4 subunit I {ECO:0000313|EMBL:KAJ53372.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.
NECEvent2014_6_4_scaffold_89_23
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17731..18189
DNA (459bp) protein (153aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDB15575.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental s
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDB15575.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental s
NADH-plastoquinone oxidoreductase subunit
NECEvent2014_6_4_scaffold_89_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18539..19057
DNA (519bp) protein (173aa)
GnaT-family acetyltransferase
GnaT-family acetyltransferase {ECO:0000313|EMBL:ACD22038.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain
GnaT-family acetyltransferase {ECO:0000313|EMBL:ACD22038.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain
NECEvent2014_6_4_scaffold_89_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19054..19218)
DNA (165bp) protein (55aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42546.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
Uncharacterized protein {ECO:0000313|EMBL:AGX42546.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_4_scaffold_89_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19415..20365
DNA (951bp) protein (317aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL09075.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
Uncharacterized protein {ECO:0000313|EMBL:KIL09075.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_4_scaffold_89_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20375..21421
DNA (1047bp) protein (349aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1345695 species="Bacteria; Firmicutes; Clostr
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1345695 species="Bacteria; Firmicutes; Clostr
NECEvent2014_6_4_scaffold_89_28
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21779..22945
DNA (1167bp) protein (389aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae
NECEvent2014_6_4_scaffold_89_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23078..25378
DNA (2301bp) protein (767aa)
Putative ATP-dependent protease {ECO:0000313|EMBL:EKY22774.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 178
Putative ATP-dependent protease {ECO:0000313|EMBL:EKY22774.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 178
ATP-dependent protease
NECEvent2014_6_4_scaffold_89_30
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25704..26039
DNA (336bp) protein (112aa)
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
spoIIAA; anti-sigma F factor antagonist
Displaying items 1-30 of 77 in total

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