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NECEvent2014_6_4_scaffold_231

Alias: 176_004_scaffold_231

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_231_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(225..2003)
DNA (1779bp) protein (593aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
ftsH3; ATP-dependent zinc metalloprotease FtsH 1 (EC:3.4.24.-)
NECEvent2014_6_4_scaffold_231_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2184..3137
DNA (954bp) protein (318aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ31023.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Uncharacterized protein {ECO:0000313|EMBL:ENZ31023.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_6_4_scaffold_231_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3152..3796
DNA (645bp) protein (215aa)
Ribonuclease HI {ECO:0000313|EMBL:EKY25125.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Ribonuclease HI {ECO:0000313|EMBL:EKY25125.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ribonuclease H-related protein
NECEvent2014_6_4_scaffold_231_4
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3865..4038
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:ERK29922.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
Uncharacterized protein {ECO:0000313|EMBL:ERK29922.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
NECEvent2014_6_4_scaffold_231_5
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4570..5688
DNA (1119bp) protein (373aa)
Retron-type reverse transcriptase {ECO:0000313|EMBL:AJH01818.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (C
Retron-type reverse transcriptase {ECO:0000313|EMBL:AJH01818.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (C
retron-type reverse transcriptase
NECEvent2014_6_4_scaffold_231_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6349..7650
DNA (1302bp) protein (434aa)
Putative Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDG02401.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chau
Putative Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDG02401.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chau
helix-turn-helix family protein
NECEvent2014_6_4_scaffold_231_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7670..8932
DNA (1263bp) protein (421aa)
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EES49261.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 s
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EES49261.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 s
tetratricopeptide repeat protein
NECEvent2014_6_4_scaffold_231_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9048..11096)
DNA (2049bp) protein (683aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH99102.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Uncharacterized protein {ECO:0000313|EMBL:EEH99102.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
transcriptional regulatory protein
NECEvent2014_6_4_scaffold_231_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11243..13846
DNA (2604bp) protein (868aa)
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
clpB2; chaperone protein ClpB
NECEvent2014_6_4_scaffold_231_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14026..14418
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:CDG02040.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
Uncharacterized protein {ECO:0000313|EMBL:CDG02040.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_6_4_scaffold_231_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14587..14781)
DNA (195bp) protein (65aa)
Small, acid-soluble spore protein C2 {ECO:0000313|EMBL:EKY22290.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DS
Small, acid-soluble spore protein C2 {ECO:0000313|EMBL:EKY22290.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DS
hypothetical protein
NECEvent2014_6_4_scaffold_231_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15128..15724)
DNA (597bp) protein (199aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83249.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
Uncharacterized protein {ECO:0000313|EMBL:AIY83249.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_4_scaffold_231_13
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15991..16368
DNA (378bp) protein (126aa)
GntR family transcriptional regulator {ECO:0000313|EMBL:KEZ88148.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidige
GntR family transcriptional regulator {ECO:0000313|EMBL:KEZ88148.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidige
transcriptional regulator, GntR family
NECEvent2014_6_4_scaffold_231_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16381..17529
DNA (1149bp) protein (383aa)
Uncharacterized protein {ECO:0000313|EMBL:EOR27575.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
Uncharacterized protein {ECO:0000313|EMBL:EOR27575.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_6_4_scaffold_231_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17603..18490
DNA (888bp) protein (296aa)
Uncharacterized protein {ECO:0000313|EMBL:KJU72574.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Uncharacterized protein {ECO:0000313|EMBL:KJU72574.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_6_4_scaffold_231_16
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18493..19047
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ01219.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Uncharacterized protein {ECO:0000313|EMBL:ENZ01219.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
NUDIX domain protein
NECEvent2014_6_4_scaffold_231_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19225..19644
DNA (420bp) protein (140aa)
Flavodoxin {ECO:0000313|EMBL:EOR20525.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
Flavodoxin {ECO:0000313|EMBL:EOR20525.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
flavodoxin
NECEvent2014_6_4_scaffold_231_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19663..20313
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:AIY80416.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
Uncharacterized protein {ECO:0000313|EMBL:AIY80416.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
NECEvent2014_6_4_scaffold_231_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20546..22000
DNA (1455bp) protein (485aa)
thrC; threonine synthase ThrC (EC:4.2.3.1)
Threonine synthase {ECO:0000313|EMBL:KHD16095.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Threonine synthase {ECO:0000313|EMBL:KHD16095.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NECEvent2014_6_4_scaffold_231_20
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22012..22908
DNA (897bp) protein (299aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
homoserine kinase
NECEvent2014_6_4_scaffold_231_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22908..23345
DNA (438bp) protein (146aa)
hypothetical protein
UPF0735 ACT domain-containing protein CLL_A2896 {ECO:0000255|HAMAP-Rule:MF_00707}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
UPF0735 ACT domain-containing protein CLL_A2896 {ECO:0000255|HAMAP-Rule:MF_00707}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_6_4_scaffold_231_22
unknown

Not on your lists

comp(23422..23592)
DNA (171bp) protein (57aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_231_23
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23757..24914
DNA (1158bp) protein (386aa)
aminotransferase, class V
Cysteine desulfarase {ECO:0000313|EMBL:ETD70130.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;
Cysteine desulfarase {ECO:0000313|EMBL:ETD70130.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;
NECEvent2014_6_4_scaffold_231_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24902..26059
DNA (1158bp) protein (386aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein T
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein T
thiI; tRNA sulfurtransferase ThiI (EC:2.8.1.4)
NECEvent2014_6_4_scaffold_231_25
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26155..26658
DNA (504bp) protein (168aa)
Putative Diamine acetyltransferase 1 {ECO:0000313|EMBL:CDG02386.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei
Putative Diamine acetyltransferase 1 {ECO:0000313|EMBL:CDG02386.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei
acetyltransferase domain protein
NECEvent2014_6_4_scaffold_231_26
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26830..27978
DNA (1149bp) protein (383aa)
hisZ; ATP phosphoribosyltransferase regulatory subunit HisZ
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
NECEvent2014_6_4_scaffold_231_27
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27969..28592
DNA (624bp) protein (208aa)
hisG; ATP phosphoribosyltransferase HisG (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; E
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; E
NECEvent2014_6_4_scaffold_231_28
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28626..29912
DNA (1287bp) protein (429aa)
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
NECEvent2014_6_4_scaffold_231_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29914..30969
DNA (1056bp) protein (352aa)
hisC2; histidinol-phosphate aminotransferase HisC (EC:2.6.1.9)
Histidinol-phosphate aminotransferase HisC {ECO:0000313|EMBL:AGX44099.1}; EC=2.6.1.9 {ECO:0000313|EMBL:AGX44099.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
Histidinol-phosphate aminotransferase HisC {ECO:0000313|EMBL:AGX44099.1}; EC=2.6.1.9 {ECO:0000313|EMBL:AGX44099.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
NECEvent2014_6_4_scaffold_231_30
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30962..31546
DNA (585bp) protein (195aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
hisB; imidazoleglycerol-phosphate dehydratase HisB (EC:4.2.1.19)
Displaying items 1-30 of 32 in total

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