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NECEvent2014_6_4_scaffold_568

Alias: 176_004_scaffold_568

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_568_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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51..1403
DNA (1353bp) protein (451aa)
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sugar phosphotransferase system (PTS), IIC component
NECEvent2014_6_4_scaffold_568_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1403..3184
DNA (1782bp) protein (594aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
glycosyl hydrolase family protein (EC:3.2.1.23)
NECEvent2014_6_4_scaffold_568_3
unknown

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comp(3334..3711)
DNA (378bp) protein (126aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_568_4
unknown

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comp(3850..4083)
DNA (234bp) protein (78aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_568_5
unknown

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4341..4649
DNA (309bp) protein (103aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_568_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4997..6280
DNA (1284bp) protein (428aa)
brnQ; branched-chain amino acid transport system II carrier protein
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:ACD22958.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:ACD22958.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_6_4_scaffold_568_7
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(6307..6744)
DNA (438bp) protein (146aa)
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADQ06531.1}; TaxID=632292 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis;
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADQ06531.1}; TaxID=632292 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis;
NECEvent2014_6_4_scaffold_568_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6942..7139
DNA (198bp) protein (66aa)
phage transcriptional regulator
Conserved domain protein {ECO:0000313|EMBL:EDT71870.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS
NECEvent2014_6_4_scaffold_568_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7154..8080
DNA (927bp) protein (309aa)
Phage replisome organizer region-containing protein {ECO:0000313|EMBL:KEH91646.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
Phage replisome organizer region-containing protein {ECO:0000313|EMBL:KEH91646.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
phage replisome organizer
NECEvent2014_6_4_scaffold_568_10
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8025..8756
DNA (732bp) protein (244aa)
hypothetical protein
ATPase AAA {ECO:0000313|EMBL:ETD70847.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
ATPase AAA {ECO:0000313|EMBL:ETD70847.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
NECEvent2014_6_4_scaffold_568_11
unknown

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8919..9122
DNA (204bp) protein (68aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_568_12
unknown

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9067..9168
DNA (102bp) protein (34aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_568_13
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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9337..10254
DNA (918bp) protein (306aa)
aminoglycoside phosphotransferase
Tax=BJP_IG2102_Acholeplasmatales_34_18
Tax=BJP_IG2102_Acholeplasmatales_34_18
NECEvent2014_6_4_scaffold_568_14
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10729..10932
DNA (204bp) protein (68aa)
Chitinase A {ECO:0000313|EMBL:BAA34922.1}; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium paraputrificum.;"
Chitinase A {ECO:0000313|EMBL:BAA34922.1}; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium paraputrificum.;"
glycosyl hydrolases 18 family protein
Displaying 14 items

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