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NECEvent2014_6_4_scaffold_89_32

Organism: NECEvent2014_6_4_Clostridium_paraputrificum_30_84

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 26496..27251

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335. similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 251.0
  • Bit_score: 433
  • Evalue 2.70e-118
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335. similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 251.0
  • Bit_score: 433
  • Evalue 2.70e-118
sigF; sporulation sigma factor SigF similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 251.0
  • Bit_score: 418
  • Evalue 1.80e-114

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Taxonomy

Clostridium chauvoei → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 756
ATGGAGAAAGGGAATTTTAAACGAGAGGAATACAATTATGATGATAACTCTCAGCTGCTTCCATTAGCTAAGGCTGGAGATGAAGTAGCTATGAATAGACTTATAGAAATGAACCTTCCACTTGTATCTTCATTAAGTAAAAAGTTTTTAAATAGAGGATATGATTATGAGGATATATTTCAAATTGGCTCTATAGGGTTAGTCAAAGCAATAAAAAACTTTGATGCATCATTTAATGTGAAGTTTTCTACTTATGCAGTTCCAATGATTGTAGGGGAAATCAAGAGATTTCTAAGAGATGACGGGATGATAAAAGTAAGTAGAAATATTAAGAGTCTTGCAAGAAAGATTCATTTCGATAAGGAAGAATTAACGAAACAGCTAGACAGAGAACCAACAATTGAGGAACTATCTGAGTATTCAGGTATAGAAAAAGAAGATTTAGTTTTTGCTGTTGAATCAGCATCTAGTTTACAATACTTATATGATACTATACACCAAGATGATGGAGCACCTGTATTGCTTATAGATAAGTTAAGTGAAAAAGGTGTAGAAGATAACGATATGATTGATAAAATTGCACTTAAAGAAGCATTAAGGTCTTTAGATGAGAAGTCTAGACAAATAATTATGCTTAGATATTTTAAAGATAAAACTCAAGTGCAAGTAGCAAAGATGCTAGGAATAAGCCAAGTTCAGGTATCTAGAATTGAAAAGAAAGTTTTAAATGTAATGAGAGATAAATTACAGGATTAA
PROTEIN sequence
Length: 252
MEKGNFKREEYNYDDNSQLLPLAKAGDEVAMNRLIEMNLPLVSSLSKKFLNRGYDYEDIFQIGSIGLVKAIKNFDASFNVKFSTYAVPMIVGEIKRFLRDDGMIKVSRNIKSLARKIHFDKEELTKQLDREPTIEELSEYSGIEKEDLVFAVESASSLQYLYDTIHQDDGAPVLLIDKLSEKGVEDNDMIDKIALKEALRSLDEKSRQIIMLRYFKDKTQVQVAKMLGISQVQVSRIEKKVLNVMRDKLQD*