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NECEvent2014_6_4_scaffold_229_22

Organism: NECEvent2014_6_4_Clostridium_paraputrificum_30_84

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(10762..11487)

Top 3 Functional Annotations

Value Algorithm Source
Phage regulatory protein, Rha family {ECO:0000313|EMBL:ERI79678.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940 similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 248.0
  • Bit_score: 185
  • Evalue 7.20e-44
Phage regulatory protein, Rha family {ECO:0000313|EMBL:ERI79678.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940 similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 248.0
  • Bit_score: 185
  • Evalue 7.20e-44
prophage antirepressor similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 226.0
  • Bit_score: 153
  • Evalue 1.00e-34

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Taxonomy

[Clostridium] symbiosum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 726
ATGAATAAACAAATTGAACAAAAATTATCAAGCAGAGAAGTTGCTGCAATGATGGAAATTAAAGAACATGGAAAGTTATTAAGAAAGATTGATGGTATAAATCAAGATTTAGCTAAAGCCAAAATTGGCTTCAGTAAATATTGGGAAGAAAGTACTTATGTAGATGCAAGTGGCAAGGTTAATAGAGAATTCCTAGTTACTAAAAGAGGTTGTGAATTTTTAGCACATAAGACTACTGGAACAAAAGGAAATTTATTCACAGATAGATATATGGATAGATTTGAACAAATGAAAGAAGTTATTTCAAATGGAAAAGTAAAGCCAGTAAAAGTAGACAATTCACTTAAAGAAAAAGAAATTGAAGCAAGATTGAAAAATGCTAGAGCAAGAGAAGCAAATATATTACTTAAGATATCTAATAATCCTAATTTATCTAAAGAATATGTACAAGTCCTACAAAGTAAAGCTACAGAAATAATAACAGGAAAAGCAATATTACCATTACCAGTAGCAGAAAGAAAAACTTATTCAGCTACAGAGATTGGAAATGAGTTAGGTATAACTTCTACTAAGGTTGGGATTCTTACTAATAAGCATAATCTTAAAACAGATAAATATGGAAAACTATTTCATGATAAGTCTAGATATTCAAGTAAAGAAGTTGAGAGCTTTAGGTATTACGATAATGTAATCCCAGTATTAGCTGAAATATTATCAAAAGCTTAG
PROTEIN sequence
Length: 242
MNKQIEQKLSSREVAAMMEIKEHGKLLRKIDGINQDLAKAKIGFSKYWEESTYVDASGKVNREFLVTKRGCEFLAHKTTGTKGNLFTDRYMDRFEQMKEVISNGKVKPVKVDNSLKEKEIEARLKNARAREANILLKISNNPNLSKEYVQVLQSKATEIITGKAILPLPVAERKTYSATEIGNELGITSTKVGILTNKHNLKTDKYGKLFHDKSRYSSKEVESFRYYDNVIPVLAEILSKA*