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NECEvent2014_6_4_scaffold_229

Alias: 176_004_scaffold_229

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_229_1
unknown

Not on your lists

comp(206..706)
DNA (501bp) protein (167aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_229_2
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(826..1272)
DNA (447bp) protein (149aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EHN14127.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA
Putative uncharacterized protein {ECO:0000313|EMBL:EHN14127.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA
hypothetical protein
NECEvent2014_6_4_scaffold_229_3
unknown

Not on your lists

comp(1262..1429)
DNA (168bp) protein (56aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_229_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1390..1680)
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:KIL09235.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_4_scaffold_229_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1805..2125)
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:EJZ50462.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Uncharacterized protein {ECO:0000313|EMBL:EJZ50462.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_4_scaffold_229_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2252..2524)
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ33486.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Uncharacterized protein {ECO:0000313|EMBL:ENZ33486.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_4_scaffold_229_7
unknown

Not on your lists

comp(2553..2759)
DNA (207bp) protein (69aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_229_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2846..5440)
DNA (2595bp) protein (865aa)
DNA primase related protein {ECO:0000313|EMBL:EES48987.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. '
DNA primase related protein {ECO:0000313|EMBL:EES48987.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. '
DNA primase
NECEvent2014_6_4_scaffold_229_9
unknown

Not on your lists

comp(5453..5686)
DNA (234bp) protein (78aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_229_10
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5707..6183)
DNA (477bp) protein (159aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56436.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
Uncharacterized protein {ECO:0000313|EMBL:AGF56436.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_6_4_scaffold_229_11
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6177..6641)
DNA (465bp) protein (155aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56435.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
Uncharacterized protein {ECO:0000313|EMBL:AGF56435.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_6_4_scaffold_229_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6628..7239)
DNA (612bp) protein (204aa)
ERCC4 domain protein {ECO:0000313|EMBL:AIY80365.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
ERCC4 domain protein {ECO:0000313|EMBL:AIY80365.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
NECEvent2014_6_4_scaffold_229_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7298..7885)
DNA (588bp) protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ83235.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Uncharacterized protein {ECO:0000313|EMBL:KJZ83235.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_6_4_scaffold_229_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7888..8511)
DNA (624bp) protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD16008.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Uncharacterized protein {ECO:0000313|EMBL:KHD16008.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_6_4_scaffold_229_15
unknown

Not on your lists

comp(8528..8845)
DNA (318bp) protein (106aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_229_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8856..9365)
DNA (510bp) protein (170aa)
Bacteriophage Mu Gam like family protein {ECO:0000313|EMBL:AIY78581.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botul
Bacteriophage Mu Gam like family protein {ECO:0000313|EMBL:AIY78581.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botul
hypothetical protein
NECEvent2014_6_4_scaffold_229_17
unknown

Not on your lists

comp(9414..9731)
DNA (318bp) protein (106aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_229_18
unknown

Not on your lists

comp(9823..10014)
DNA (192bp) protein (64aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_229_19
unknown

Not on your lists

comp(10004..10222)
DNA (219bp) protein (73aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_229_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10222..10497)
DNA (276bp) protein (92aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43992.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
Uncharacterized protein {ECO:0000313|EMBL:AGX43992.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_4_scaffold_229_21
unknown

Not on your lists

comp(10552..10701)
DNA (150bp) protein (50aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_229_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10762..11487)
DNA (726bp) protein (242aa)
Phage regulatory protein, Rha family {ECO:0000313|EMBL:ERI79678.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940
Phage regulatory protein, Rha family {ECO:0000313|EMBL:ERI79678.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940
prophage antirepressor
NECEvent2014_6_4_scaffold_229_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11498..11704)
DNA (207bp) protein (69aa)
conjugative transposon egulatory protein
Putative conjugative transposon egulatory protein {ECO:0000313|EMBL:ACD23668.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
Putative conjugative transposon egulatory protein {ECO:0000313|EMBL:ACD23668.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
NECEvent2014_6_4_scaffold_229_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11950..12381
DNA (432bp) protein (144aa)
transcriptional regulator
Putative DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDH89844.1}; Transcriptional regulator {ECO:0000313|EMBL:ACD24183.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridia
Putative DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDH89844.1}; Transcriptional regulator {ECO:0000313|EMBL:ACD24183.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridia
NECEvent2014_6_4_scaffold_229_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12408..12836
DNA (429bp) protein (143aa)
hypothetical protein
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CDH89843.1}; Uncharacterized protein {ECO:0000313|EMBL:ACD24520.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CDH89843.1}; Uncharacterized protein {ECO:0000313|EMBL:ACD24520.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
NECEvent2014_6_4_scaffold_229_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12875..14302
DNA (1428bp) protein (476aa)
Phage protein {ECO:0000313|EMBL:EES50765.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'
Phage protein {ECO:0000313|EMBL:EES50765.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'
hypothetical protein
NECEvent2014_6_4_scaffold_229_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14373..16043
DNA (1671bp) protein (557aa)
Resolvase {ECO:0000313|EMBL:KJU72492.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Resolvase {ECO:0000313|EMBL:KJU72492.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
resolvase
NECEvent2014_6_4_scaffold_229_28
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16337..17002)
DNA (666bp) protein (222aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
deoxyribose-phosphate aldolase (EC:4.1.2.4)
NECEvent2014_6_4_scaffold_229_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17075..17935)
DNA (861bp) protein (287aa)
dacB; D-alanyl-D-alanine carboxypeptidase DacB (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase DacB {ECO:0000313|EMBL:AGX43602.1}; EC=3.4.16.4 {ECO:0000313|EMBL:AGX43602.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
D-alanyl-D-alanine carboxypeptidase DacB {ECO:0000313|EMBL:AGX43602.1}; EC=3.4.16.4 {ECO:0000313|EMBL:AGX43602.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
NECEvent2014_6_4_scaffold_229_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18076..18639
DNA (564bp) protein (188aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD24290.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
Uncharacterized protein {ECO:0000313|EMBL:ACD24290.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
Displaying items 1-30 of 41 in total

View Taxonomy